KEGG   Ficedula albicollis (collared flycatcher): 101819569
Entry
101819569         CDS       T02815                                 
Symbol
RNF13
Name
(RefSeq) ring finger protein 13
  KO
K15692  E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]
Organism
fab  Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:fab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fab04121]
    101819569 (RNF13)
Enzymes [BR:fab01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101819569 (RNF13)
Ubiquitin system [BR:fab04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101819569 (RNF13)
SSDB
Motif
Pfam: zf-RING_2 PA zf-RING_11 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-rbx1 zf-RING_5 zf-RING_UBOX zf-ANAPC11 Neur_chan_memb Prok-RING_4 FeoB_associated zf-RING_16 zf-RING_4
Other DBs
NCBI-GeneID: 101819569
NCBI-ProteinID: XP_005051523
UniProt: A0A803VC81
Position
9:complement(26581068..26598675)
AA seq 381 aa
MLLSIGMLMLSATQIYTIVTVQLFAFLNLLPVEADILAYNLENGTQTFDDLPARFGYRLP
AEGLKGFLINSKPENACEPIAPPPLRDNSSGAFIVLIRRLECNFDVKVLNAQRAGYKAAI
VHNVDSDDLISMGSNDIEILKKIDIPSVFIGEKSANSLKEEFTYEKGGHVVLIPEFSLPL
EYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVC
AICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSETDSSQ
EENEVSENTPLLRPLASVSTQSFGALAESHSHQNTTESSEYEEDDNDNGDSSDAENGMNE
ESVVVQLQPSEDREYRVANTV
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgctgttatcaataggaatgctgatgttgtctgccactcagatatacactattgtgact
gtgcagttatttgccttcctgaatcttttacctgtggaggcagatattttagcatataac
cttgaaaatggaacccaaacatttgatgatctacctgctagatttggctacagactgcca
gcagaaggcttgaagggatttctaataaattccaaaccagagaatgcatgtgagcctata
gccccacctccgctgagggacaactcctctggtgcttttattgtcttgatccgaaggctg
gagtgcaactttgatgtcaaggtgttaaatgcccagagagctggatacaaggcagctata
gttcacaatgtcgattctgatgacctcataagcatgggatccaacgacattgagatttta
aagaagattgatattccttctgtctttattggtgagaagtcagctaattctcttaaagag
gagtttacttatgaaaaaggtggccatgttgtgttaatcccagagttcagtcttcctttg
gagtactacttaatccctttcctgataatagtagggatctgtcttattctcatcgtcata
tttatgataacaaaatttgttcaggacagacacagagcaagaaggaatcggcttaggaag
gatcagcttaagaaacttcctgtacataagtttaagaaaggagatgaatacgatgtgtgt
gccatctgtctggatgaatatgaggatggagacaagctcaggatccttccatgctctcat
gcatatcactgcaagtgtgtggacccgtggctgacgaaaacaaaaaaaacctgtcctgtg
tgtaagcagaaggtggtcccttcccagggggactctgactcagagacagacagcagccag
gaggagaatgaggtgtctgagaacacccctctgctcaggcctctggcctcggtcagcacg
cagtccttcggggctctggccgagtcccactcgcaccagaacaccaccgagtcctccgag
tatgaggaggatgacaatgacaatggtgatagcagtgatgcagaaaatggcatgaatgaa
gaaagtgtagtggttcagctgcagcccagtgaggacagggagtacagagtggcaaacact
gtctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (27)   

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