KEGG   Ficedula albicollis (collared flycatcher): 101819699
Entry
101819699         CDS       T02815                                 
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase 1
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
fab  Ficedula albicollis (collared flycatcher)
Pathway
fab00260  Glycine, serine and threonine metabolism
fab00630  Glyoxylate and dicarboxylate metabolism
fab00670  One carbon pool by folate
fab01100  Metabolic pathways
fab01200  Carbon metabolism
fab01230  Biosynthesis of amino acids
fab01240  Biosynthesis of cofactors
Module
fab_M00141  C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:fab00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    101819699 (SHMT1)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    101819699 (SHMT1)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    101819699 (SHMT1)
Enzymes [BR:fab01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     101819699 (SHMT1)
SSDB
Motif
Pfam: SHMT DegT_DnrJ_EryC1
Other DBs
NCBI-GeneID: 101819699
NCBI-ProteinID: XP_005054411
UniProt: U3KGZ9
Position
14:9779960..9784752
AA seq 482 aa
MANSTQGLPSAELWASHNKMVLEPLETNDPEVHSIIKKEKQRQRLGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEFVDELERLCQKRALQAYRLDPQKWGVNVQPYSGS
PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSLFFESMPYKVNPKTGYI
DYDKLEENARLFHPKLIIAGVSCYSRNLDYARMRKIADDNGAYLMADMAHISGLVAAGVV
PSPFEHCDIVSTTTHKTLRGCRAGMIFYRKGTRSVDPKTGKETLYNLESLINQAVFPGLQ
GGPHNHAIAGIAVALHQAMTPEFKAYQQQVVANCKALSSALMEMGYDIVTGGSDNHLILV
DLRSKGTDGSRAERVLELCSIACNKNTCPGDVSALRPSGLRFGSPALTSRGFRQDDFRKV
AQFIHRGIELAVRVQKDMSPKATLKEFKDKLEEPKYHGELKALKEEVEAFAATFPLPGLP
VL
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgaactcaacacagggactccccagcgccgagctctgggcctcccataacaagatg
gtgttggagccactggagaccaatgacccagaggtgcacagcatcatcaagaaggagaag
cagcggcagaggttggggctggagttaattgcatcagagaactttgccagccgagcggtc
ttggaggccctgggatcctgcatgaacaacaaatactccgagggttacccaggacagagg
tactacggcgggacggagtttgtggacgagctggagaggctgtgccagaagcgagccctg
caggcctaccggctcgacccccagaagtggggagtcaatgtccagccctactcagggtca
cccgcaaactttgcggtgtacacggccctggtggagccccacggcaggatcatggggctg
gacctgcccgatggcggccacctcacccacgggttcatgacagacaagaagaagatctct
gccacctctctcttcttcgagtccatgccctacaaggtcaaccccaaaactggttacatc
gactatgacaagctggaggagaacgcccggctcttccaccccaagctgatcatagcaggt
gtcagctgctactcgcggaacctggactacgcccgcatgcggaagatcgccgacgacaac
ggcgcctatctgatggccgacatggcgcacatcagcgggctggtggccgccggcgtggtg
ccctcgcccttcgagcactgcgacatcgtctccaccaccacccacaagaccctgcggggc
tgcagggccggcatgatcttctaccgcaaaggcacccgcagcgtggaccccaagacgggc
aaggagaccctctacaacctggagagcctcatcaaccaggcggtgtttccggggctgcag
ggaggcccacacaaccacgccattgcagggattgccgtggcactgcatcaggccatgaca
cccgagttcaaggcttaccagcagcaggtggtggccaactgcaaggcactctcatcagcg
ctgatggagatgggctatgacattgtcacagggggctctgacaaccacctgatcctggtg
gacctgcgcagcaaaggcacagacggcagccgggccgagcgggtgctggagctctgctcc
atcgcctgcaacaagaacacgtgccctggtgatgtcagcgccctgcgccccagcgggctc
cggttcggctcgccggcgctcacctcgcgcggcttccggcaggacgatttccgcaaggtg
gcccagttcatccacagagggatcgaactggctgtgcgcgtgcagaaggacatgagcccc
aaggccacgctgaaggaattcaaggacaaactggaggaaccaaaataccatggggagctg
aaggcactgaaggaagaggtagaagcctttgcagccacgttcccgctcccagggctgcct
gtcctgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (7)   
   KEGG MODULE (5)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

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