KEGG   Ficedula albicollis (collared flycatcher): 101820932
Entry
101820932         CDS       T02815                                 
Symbol
ATG4A
Name
(RefSeq) autophagy related 4A cysteine peptidase
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
fab  Ficedula albicollis (collared flycatcher)
Pathway
fab04136  Autophagy - other
fab04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:fab00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    101820932 (ATG4A)
   04136 Autophagy - other
    101820932 (ATG4A)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:fab01002]
    101820932 (ATG4A)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:fab04131]
    101820932 (ATG4A)
   03029 Mitochondrial biogenesis [BR:fab03029]
    101820932 (ATG4A)
Peptidases and inhibitors [BR:fab01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   101820932 (ATG4A)
Membrane trafficking [BR:fab04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    101820932 (ATG4A)
Mitochondrial biogenesis [BR:fab03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    101820932 (ATG4A)
SSDB
Motif
Pfam: Peptidase_C54
Other DBs
NCBI-GeneID: 101820932
NCBI-ProteinID: XP_005045998
Position
4A:12176022..12188786
AA seq 395 aa
MEAVLSRYENQITILSDYLEEFPETDEPVWILGRQHHLNTDKSKLLLDISARLWFTYRRK
FSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWQWEKHKKQPEEYHRILRCFLD
RKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIE
DIKKMCWSPAQSVAHSSAHLHRSALGQNKNTAGLCPGWKPLLLIIPLRLGINHINPVYID
AFKECFKMPQSLGALGGKPNNAYYFIGFLGNELIYLDPHTTQSFVDSEENGTVDDQSFHC
QQAPHRMKIMNLDPSVALGFFCKEECDFDNWCSLVQKEILKQQSLRMFELVQKHPPHWPP
FIPPTKPEVTTTGAELIESTDKLFELEEEFEILSV
NT seq 1188 nt   +upstreamnt  +downstreamnt
atggaggccgttttatctaggtatgaaaaccagatcactattttgtcagactacttagaa
gagtttccagaaactgatgagccagtgtggattttaggaaggcaacaccacctgaacaca
gacaaatctaagttattgttggatataagtgctcgtctctggtttacatatagaagaaag
ttttcgcctattggaggcactggtccctcatctgatgcaggctggggatgcatgctgaga
tgtgggcagatgatgttggcccaggcactgatctgcagacatttaggaagagattggcaa
tgggaaaaacacaaaaaacaaccagaggaatatcatagaatcttacggtgctttctggat
agaaaagattgctgttattccatccaccaaatggcacagatgggtgttggagaggggaag
tccattggagaatggtttggaccaaatacagttgctcaagtactgaagaagcttgcttta
tttgatgaatggaattcattagcagtttatgtttctatggataatacagtggtcatcgaa
gacatcaagaagatgtgctggtcccctgctcagagcgttgcccacagcagtgcacacttg
cacagaagtgctcttggccaaaacaagaacacagcaggattgtgcccaggctggaagccc
ctcttgctcatcatccctctccggctaggaattaatcacatcaatccagtgtatattgat
gcgtttaaagaatgctttaagatgccacagtctttgggagcattaggagggaaacccaat
aatgcctattattttataggatttttaggcaatgagctgatctacttggaccctcacacc
actcagagttttgtagattcagaagaaaatggcacagttgatgaccagagcttccactgc
cagcaagccccacacagaatgaagatcatgaatttggacccttcagtagctttaggcttc
ttttgcaaagaagaatgtgattttgataactggtgtagtcttgtacaaaaggagattcta
aagcaacagagcctacggatgtttgagctggtccagaagcacccaccacactggcctcct
ttcatacctccgaccaagccagaagtgacaaccacaggagcagaactcattgaatctact
gacaagctatttgaattggaagaagaatttgaaatcctcagtgtatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

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