KEGG   Ficedula albicollis (collared flycatcher): 101822244
Entry
101822244         CDS       T02815                                 
Symbol
SOX7
Name
(RefSeq) SRY-box 7
  KO
K09270  transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
fab  Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:fab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:fab03000]
    101822244 (SOX7)
Transcription factors [BR:fab03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    101822244 (SOX7)
SSDB
Motif
Pfam: Sox17_18_mid HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 101822244
NCBI-ProteinID: XP_016152578
Position
3:114481614..114483662
AA seq 375 aa
MELAEFICLDLFTNPKPTLCGDLGLSESEQRPHSSANSPPFFSCGIFGMWDIGRPWEAAG
AKGSVSCISGKSWKALSLSQKRPYVEEAERLRVKHMQDYPNYKYRPRRKKQVKRIGKRVD
PGFLLGSLSRDQNSVPEKRTCSRAGGDKEGPGEYQPRPGLPAVRGYREAAGSGSSASVDT
YPYGLPTPPEMSPLDAIDPEQSFFSSPCPEEHHRSHFSPEYAAGSLPCGHHPLSPMPQPA
TCMIPPASSCPSLPPPPPPPPPSYYTPSFPSLPPASLHAHLGQLSPPPDHHGFDTLDQLS
QAELLGEMDRNEFDQYLNNPGHADHHGDHQGHHQGGALASGHVPASGSSHSSDNSLISSV
LADATATYYNNYSVS
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggagctggcagagttcatctgcctggatttattcactaaccctaaacccaccttgtgt
ggggacttgggattaagtgagtcagagcagagaccccatagcagcgccaattcccccccc
ttcttctcctgcgggatttttgggatgtgggatatcgggcgcccttgggaggctgcgggt
gctaaagggagcgtgtcctgcatttcagggaagtcctggaaggcgctgagcctgtcgcag
aagcgtccctacgtggaggaagccgagcggctgcgggtgaagcacatgcaagattatccc
aactacaagtaccggccccgtcggaagaagcaggtcaagcgcatcgggaagagggtggat
cccggctttctgctgggcagcctgagccgggaccagaactcagtgccggaaaagcggacc
tgcagccgggccgggggggacaaagagggcccgggtgagtaccagccccgcccggggctg
ccggccgtgcggggctaccgggaggctgcgggcagcggcagcagcgccagcgtggacacc
tacccctacgggctgcccaccccgccggagatgtcccccctggacgccatagaccccgag
cagagcttcttctcctcgccctgccccgaggagcatcaccgctcgcacttctccccggag
tacgcggcaggctccttgccctgcggccaccacccgctcagccccatgccgcagccggcc
acctgcatgatccccccggcctccagctgcccttcccttccccctcctcctcctcctcct
cctcccagctactacacaccctccttcccctccctgccccctgccagcctccatgcccac
ctgggccagctctccccgccgcccgaccaccacggcttcgacaccttggaccagctgagc
caagcggagctgctgggggagatggaccgcaatgagttcgaccaatatctcaacaacccc
ggccacgctgaccaccacggcgaccaccagggccaccaccagggcggggctttggccagc
gggcacgtcccggcgtccggcagctcgcacagctccgacaacagcctcatctcctccgtc
ctggccgatgccacggccacctactacaacaactacagcgtgtcttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (38)   

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