KEGG   Frankia alni: FRAAL6052
Entry
FRAAL6052         CDS       T00384                                 
Name
(GenBank) conserved hypothetical protein
  KO
K10979  DNA end-binding protein Ku
Organism
fal  Frankia alni
Pathway
fal03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:fal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    FRAAL6052
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fal03400]
    FRAAL6052
DNA repair and recombination proteins [BR:fal03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     FRAAL6052
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: CAJ64676
RhizoBase: FRAAL6052
UniProt: Q0RCZ8
Position
complement(6568188..6569300)
AA seq 370 aa
MRSIWKGVISFGLVSIPVRLYSATQERDVAFHQVRRSDGSRVRYRRVAEADGDEVNYADI
AKGYELPDGQTVVLTDEDFANLPLSTSRAIDVLEFVPLEQVDPIYFAKSYYIEPDRTGAK
PYVLLRDALAESGRVALVKIALRQREQLATLRVRDGVFVLETMIWPDEVREPDFPFLDED
VEVRPQELAMAASLIDTLAADFDPTRFTDEYREALQSVIDAKIAGREVVSPPASPEQEPV
GDLMAALRASIAAARRDHPDGAGAAEPAEPVAAAEPADEKASPPEVRGTASKTAPAKAAP
AKAAPARTTAAKAARTTAAKSAPARTTAAKGTGARGTAAKDAAAKGETARGAAKSKAAPA
HTAAPTRRSA
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgcgttcgatctggaagggtgtgatctccttcggcctggtgtcgatcccggtccggctc
tactccgcgacgcaggaacgggatgtcgcatttcaccaggtcaggcgctcggatgggtcc
cgcgtgcggtatcgccgagtggcggaggccgacggggacgaggtcaactacgccgacatc
gccaagggttacgagctgccggacggccagaccgtcgtgctcaccgacgaggacttcgcg
aacctgccgttgtccacctcccgggcgatcgatgtgctcgagttcgtcccgctggagcag
gtcgacccgatctacttcgccaagagctactacatcgaaccggaccgcaccggcgcgaag
ccctacgtcctgttgcgcgacgcgctcgccgaatcgggccgcgtcgcgctggtgaagata
gctctgcggcagcgcgagcagctcgcgacgctccgggtgcgcgacggcgtcttcgtcctg
gagacgatgatctggccggacgaggtgcgcgagccggacttcccgttcctggacgaggac
gtcgaggtgcgtccgcaggagctggcgatggccgcctcgctgatcgacaccctcgccgcc
gacttcgaccccacccggttcaccgacgagtaccgggaggctctgcagtcggtcatcgac
gccaagatcgccggccgtgaggtggtcagcccgccggccagcccggagcaggagccggtc
ggggacctgatggccgcgctgcgcgcgagcatcgccgccgcccggcgggaccaccccgac
ggtgccggcgccgccgagcccgccgaacccgtcgctgccgccgagcccgccgacgagaag
gccagcccaccagaagtgagaggcacggcgtcgaagaccgccccagccaaggccgcgcct
gccaaggccgcgcctgccagaacgacggcggccaaggccgccagaacgacggcggccaag
tccgcgcctgccagaaccacggcggccaagggcaccggcgccaggggcactgcagccaag
gacgcggccgccaaaggcgagaccgcccggggagccgcgaaatcgaaggccgcgcctgca
cacaccgctgcgcccacccgacgctcagcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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