KEGG   Frankia alni: FRAAL6123
Entry
FRAAL6123         CDS       T00384                                 
Symbol
dapE
Name
(GenBank) Succinyl-diaminopimelate desuccinylase (SDAP)
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
fal  Frankia alni
Pathway
fal00300  Lysine biosynthesis
fal01100  Metabolic pathways
fal01120  Microbial metabolism in diverse environments
fal01230  Biosynthesis of amino acids
Module
fal_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:fal00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    FRAAL6123 (dapE)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:fal01002]
    FRAAL6123 (dapE)
Enzymes [BR:fal01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     FRAAL6123 (dapE)
Peptidases and inhibitors [BR:fal01002]
 Metallo peptidases
  Family M20
   FRAAL6123 (dapE)
SSDB
Motif
Pfam: Peptidase_M20 M20_dimer Peptidase_M28
Other DBs
NCBI-ProteinID: CAJ64746
RhizoBase: FRAAL6123
UniProt: Q0RCS8
Position
complement(6647101..6648192)
AA seq 363 aa
MDLDLTAPVGELTRRLVDVPSVSGEEAALADAVEKALAAVDGLRVARDGDAVVARTFLGR
PSRILLAGHLDTVPLADNLPARVVGGRLYGCGTSDMKAGVAIALRLAATLPLTDASAPAG
VGALRHDVTWICYDNEEVTADRNGLRRLAARHRDWLDADLAILMEPTSGEVEAGCQGTLR
AVVTLPGTRAHSARSWLGDNAVHKAAEVLRRLGEYRARTVTLDGCTYREGLSAVRIDGGV
AGNVIPDLCRVTVNFRFAPDRTVENAFAHVREVFDGYDLELTDRAGGAPPGLAAPAAAAF
VAATGRVPVAKYGWTDVARFAELGIPALNYGPGDPNLAHTRDEYVELAAIDEGERLLRRY
LTS
NT seq 1092 nt   +upstreamnt  +downstreamnt
atggatctggatctcaccgccccggtgggcgagctcactcggcggctggtcgacgtgccg
tccgtcagcggcgaggaggccgcgctggcggacgcggtggagaaggcgctggcggcggtc
gacgggctgcgggtcgcccgcgacggtgacgccgtggtggcccggaccttcctcggccgg
ccgtcgcggatcctgctcgcggggcatctggacacggtcccgctggcggacaacctcccc
gcgcgggtggtgggcgggcgcctctacggctgcggcacctccgacatgaaggcgggcgtg
gcgatcgcgctgcggctcgcggccaccctgccgctcaccgatgcctccgcccccgccggt
gtcggcgcgctgcggcatgacgtcacctggatctgctacgacaacgaggaggtcacggcg
gaccgcaacgggctgcgccgcctcgccgcccggcaccgggactggctggacgcggacctc
gccatcctcatggagcccacctccggcgaggtggaggccggctgccagggcacgctgcgc
gccgtcgtcacgttgcccggcacccgggcgcactccgcccgttcctggctcggtgacaac
gccgtccacaaggccgccgaggtcctgcgtcggctcggcgagtaccgggcccggacggtg
acgctcgacggatgcacctaccgtgaggggttgtccgcggtccgcatcgacggcggcgtg
gccggcaacgtgatccccgacctgtgccgggtgacggtgaacttccgtttcgcgccggat
cgcacggtcgagaacgccttcgcccatgtccgggaggtcttcgacggctacgacctggag
ctgaccgaccgggcgggcggcgcgccccccgggcttgccgcaccggccgcggccgccttc
gtggccgccaccggtcgcgtcccggtggcgaagtacggctggacggacgtcgcgcgcttc
gccgagctcggcatcccggcgctgaactacggcccgggtgacccgaacctcgcccacacc
cgcgacgagtacgtcgaactcgccgcgatcgacgagggcgaacggctgctgcgccgctac
ctgacctcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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