KEGG   Ferriphaselus amnicola: OYT1_ch1068
Entry
OYT1_ch1068       CDS       T05631                                 
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
fam  Ferriphaselus amnicola
Pathway
fam03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    OYT1_ch1068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fam03400]
    OYT1_ch1068
Enzymes [BR:fam01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     OYT1_ch1068
DNA repair and recombination proteins [BR:fam03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     OYT1_ch1068
    RecFOR pathway proteins
     OYT1_ch1068
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 AAA_16 Mg_chelatase Rad17 AAA_3 AAA_22 AAA_18 nSTAND3 AAA_14 AAA_2 TsaE DUF815 AAA_17 RNA_helicase NTPase_1 AAA_28 NB-ARC AAA_24 NACHT AAA_33 IstB_IS21 AAA_19 Sigma54_activ_2 AAA_25 ABC_tran bpMoxR Zeta_toxin
Other DBs
NCBI-ProteinID: BBE50628
UniProt: A0A2Z6GAV7
Position
1095007..1096062
AA seq 351 aa
MIHTDDLTSGSRLISPVPVSVREEALERALRPKQLDEYVGQEKVRGQLSLFIEAAKMRQE
PLDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEPNDVLFID
EIHRLSPVVEEILYPALEDYQIDIMIGEGPGARSVKLDLPPFTLVGATTRAGMLTNPLRD
RFGIIGRLEFYTPQELQRIVMRSSGLLEMNLSDDGALEVARRSRGTPRIANRLLRRVRDY
ADVRAGGDASRKVADAALTMLDVDAQGLDLMDRKLLLTVIEKFAGGPVGVDNLAAAIGEE
RDTIEDVLEPYLIQQGYLQRTPRGRMATANAWLHFGLPQPGNPANKELWSD
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgattcacaccgacgatcttacttctggctcccgcctgatctcgcctgtgcctgtttcg
gtcagggaagaggcgctggagcgcgcgctacgtcctaagcaactcgacgaatacgtcggg
caggagaaggttcgtgggcagctatcgctattcatcgaggcggcgaagatgcggcaggaa
ccgctggatcacgtgttgttgttcggtccgccggggctgggcaagacgaccttggcacac
ataattgcgcgtgagatgggggtgaatctgcgccagacctcggggccggtgctggagagg
gcaggggatctagcagcgctgctgaccaatctggagccgaacgatgtgttgttcatcgac
gaaattcatcgtctgtcgccggtggtggaggaaattctgtatcccgcgctggaggactat
cagatcgacatcatgatcggagaggggccgggggcgcgctcggtgaagctcgatctgccg
ccgtttacactggtcggcgcgaccacccgcgctgggatgttgaccaatcccttgcgcgac
cgtttcggcatcatcgggcggctggagttctacacgccgcaagagttgcagcgcatcgtg
atgcgctcgtctgggctgctggagatgaatctgtccgacgacggtgctttggaagtggcg
cgccgttcgcgcggcacgccacgtatcgccaatcgtctgctacgccgcgtgcgagattac
gccgatgtgcgcgcgggcggtgatgccagtcgcaaggtggctgatgcggcgctgaccatg
ttggatgtggatgcgcaggggctggatctaatggaccgcaagttgctgctcacggtgatc
gagaaatttgctggcgggcccgttggcgtggataacctcgcggctgctattggcgaagag
cgtgacaccatcgaagatgtgctggaaccgtacctgatccaacagggttacctgcaacgc
acgccgcgtggacgcatggcgacggccaacgcttggctgcatttcggcttgccgcaaccg
ggtaatccggccaataaggaattgtggagtgactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (32)   
   Pfam (32)   
All databases (42)   

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