KEGG   Rhodobacteraceae bacterium SC52: G5B39_11495
Entry
G5B39_11495       CDS       T06457                                 
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
faq  Rhodobacteraceae bacterium SC52
Pathway
faq00550  Peptidoglycan biosynthesis
faq01100  Metabolic pathways
faq01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:faq00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    G5B39_11495 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    G5B39_11495 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:faq01011]
    G5B39_11495 (mrdA)
Enzymes [BR:faq01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     G5B39_11495 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:faq01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   G5B39_11495 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer CheW
Other DBs
NCBI-ProteinID: QIE42500
UniProt: A0A858CMV6
Position
2340121..2342064
AA seq 647 aa
MRRPVKDNDDSARKISRRALVLGGAQLGFAGLLAWQMRKMQIEEADKFRLLAEENRINLR
LLPPARGLIFDRNGVPIAENDQNYRVVIVREDAGDVAAVLDQLRKIIPLSDEDVARTLAE
TKRRVRFVPVTVADRLTWEDLSRVAVNAPALPGVRPEVGLSRSYPLGSDFAHVVGYVGPV
SDYDLSKLDNPDPLLQIPEFQIGKSGVEARMEGVLRGRAGTSQIEVNAAGRVMRELSRDE
GLSGRNIQLTIDEGLQNYVQARMFGESAACVVMEVETGDLKAVCSSPTFDPNLFVRGISV
ADYRMLTDNKYRPLANKSVQGVYPPGSTFKMVTALAALEAGVVGPEDTVWCPGYLSTAGR
RFHCWKRGGHGHMNMHDSLVQSCDVYYYEVAQKVGIDKISAMARKLGIGVRHDIPMSAVA
EGLAPTQSWKQTRRGEGWVIGDTINASIGQGFVLASPLQLAVMTARLAGGTDIAPRLVRA
VDGVPQEIRVTGALDLNPAHLRAVRRAMTAVSNTRRGTGYRSRIVDDTMQMAGKSGTSQV
RNITTAERARGVFRNEDLPWERRDHALFVSYAPTDRPQYAVSVVVEHGGGGSAAAAPVAR
DVLLRVMNGALPPLEAYPASQRDMIEEQQRELPLRDRALKPPSSSRA
NT seq 1944 nt   +upstreamnt  +downstreamnt
atgagacggccggtcaaagacaatgatgacagcgcccgcaagatcagccgccgtgcgctt
gtgctgggcggcgcgcagcttggctttgccgggttgctggcgtggcaaatgcggaagatg
cagatcgaagaggccgacaagttccgccttttggccgaagagaaccgcatcaacctgcgg
cttttgccgcctgcgcgcggtttgatctttgatcgcaacggcgtgccaattgccgagaac
gatcagaactatcgcgttgtgatcgtgcgtgaagatgcgggagacgtggccgcagttctg
gaccagttgcgcaagatcatcccgctgagcgacgaagacgtggcgcgcacccttgcagag
acaaagcggcgggtgcggtttgttcctgtcacggtggcagaccggctgacttgggaagat
ctgtcgcgcgtggctgtcaatgccccggccctgcccggtgtgcgcccagaggtcggcttg
tcccgcagttatccactgggatcggatttcgcgcatgtggtggggtatgttggcccggtc
agtgactatgatctgtccaagctcgacaaccccgacccactgcttcagatcccggaattc
cagatcggcaaaagcggtgtcgaggcgcgaatggaaggcgtgctgcgcggccgcgccgga
accagccagatcgaagtgaacgcggccgggcgtgtcatgcgcgagctgtcccgtgacgaa
ggcttgtcaggccgaaatatccaattgaccatcgacgaagggctgcagaattatgttcag
gcgcggatgtttggcgaaagcgccgcctgcgttgtgatggaagtggaaaccggcgatctc
aaggcggtctgctcgtcgccgacctttgacccgaacctgttcgtgcggggcatttcagtc
gccgattaccggatgctgacagacaacaagtatcgccccctcgccaacaaatcggtgcaa
ggtgtgtacccgccgggatcgactttcaagatggtcaccgcccttgccgcgctggaggct
ggggtcgtcggccccgaagacaccgtatggtgccccggatacctaagcaccgcaggccgc
aggtttcactgctggaagcgcggcgggcacgggcacatgaacatgcatgacagcctcgtg
cagtcgtgcgacgtgtactattacgaggtggcgcagaaggtcgggatcgacaagatatct
gcgatggcgcgaaagcttgggattggcgtgcgccatgacattcccatgtccgccgtggcg
gaagggctggccccgacacagagttggaaacagacccgccggggcgaaggctgggtgatt
ggtgacacgatcaatgccagcatcgggcaaggctttgttctggcctcgccgctgcaactg
gcggtgatgaccgcgcggcttgccggcggcaccgatattgcgccccgtcttgtgcgtgcc
gtagacggtgttccccaggaaattcgcgtgaccggtgcgctggacctgaacccggcgcat
ttgcgagcggttcgccgggccatgaccgccgtcagcaatacccgccgcggcaccggctat
cgctcgcgtatcgtggatgacaccatgcaaatggctgggaaatccggcaccagccaagta
cgcaacatcaccaccgcagaacgcgcccgcggcgtgtttcgcaacgaagacctgccttgg
gagcggcgagatcacgccctgtttgtcagctatgcgccgacggaccggccccaatacgcc
gtgtctgtagttgtcgagcatggcggcggtgggtcggccgccgcagcgccggttgcccgt
gatgtcttgcttcgggtgatgaacggcgcgctgcccccgcttgaagcctatcccgcatca
cagcgcgacatgatcgaagagcaacaacgcgagctgcccctgcgggaccgcgcgctcaag
ccgccctcgagcagccgcgcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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