KEGG   Flavobacteriaceae bacterium 3519-10: FIC_00821
Entry
FIC_00821         CDS       T00953                                 
Name
(GenBank) Signal recognition particle, subunit Ffh SRP54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
fba  Flavobacteriaceae bacterium 3519-10
Pathway
fba02024  Quorum sensing
fba03060  Protein export
fba03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:fba00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    FIC_00821
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FIC_00821
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FIC_00821
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:fba02044]
    FIC_00821
Enzymes [BR:fba01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     FIC_00821
Secretion system [BR:fba02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   FIC_00821
  Eukaryotic Sec-SRP protein
   FIC_00821
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin cobW CbiA AAA_22 ATPase ArsA_ATPase CLP1_P KAP_NTPase APS_kinase nSTAND3 AAA_30 AAA_16 ResIII SLFN-g3_helicase AAA_19 AAA_18 AAA_31 AAA_33 DO-GTPase1 AAA_24 ATP_bind_1 NTPase_1 KTI12 ATPase_2 NACHT NB-ARC AAA_14 DUF2780 AtuA Thymidylate_kin AAA_17 MMR_HSR1 6PF2K Nup35_RRM TsaE
Other DBs
NCBI-ProteinID: ACU07274
UniProt: C6X4D6
Position
complement(859432..860799)
AA seq 455 aa
MFNSLQDKLDKALHNISGRGKITEINVAETVKEIRRALVDADVNYKVAKDLTKRVQDKAL
GQNVLTSLSPGQLMTKIVHDELVDLMGKTHEGINLSGKPSVILIAGLQGSGKTTFSGKLA
NYLKEKRNKKPLLVACDVYRPAAIEQLKILGQQTGIPVYTEEGALNPSSIAENAVKFAKE
NNHDVVIVDTAGRLAIDEQMMNEIKSVHYFIKPNETLFVVDSMTGQDAVNTAKAFNEALN
FDGVVLTKLDGDTRGGAALTIRSVVEKPIKFISTGEKMEALDVFYPERMADRILGMGDVV
SLVERAQEQFDEEEAKKLHKKIAKNEFGFDDFLKQINQIKKMGNMKDLMGMIPGVGKAIK
DVDIQDDAFKHIEAIIHSMTPDERRRPSIINTQRKNRIARGAGRKIEDVNALMKQFEQMG
KMMKMMQGPQGKQMMEMMSKGMPKVPGMGGSPFGK
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgttcaacagtttacaggataagttagataaagcactccacaatatatcgggccgcgga
aaaatcactgagattaacgttgccgaaacggtgaaggaaatccgccgtgcactggtggat
gccgatgttaactacaaagttgcgaaagatttaaccaaaagagttcaggataaagcttta
gggcaaaacgttctcacaagcttgtcaccgggtcagcttatgaccaagattgttcacgac
gaactggtagatctgatgggtaaaacacatgaaggtatcaacctttcgggtaaacccagt
gtaattcttattgcaggtctacagggatcgggtaaaaccacattttcggggaaacttgcc
aattatttaaaggagaaacgcaacaaaaaaccattgttggtggcatgcgacgtctatcgt
ccggccgcgattgagcagcttaaaatactcggacagcaaaccggaattccggtatatacc
gaagaaggcgccttaaatccctcctctattgcggagaacgccgtgaagtttgcgaaagaa
aacaaccacgatgttgtaattgtggataccgcaggccgccttgcgattgatgagcaaatg
atgaacgaaataaaatcggttcattattttattaagccaaatgaaaccctgttcgtggtc
gattcgatgacgggtcaggatgctgtgaatacggcaaaagcttttaatgaagcactgaat
ttcgacggtgttgtacttaccaaattagacggtgatacgcgtggtggagctgccttaacg
atccgttccgttgttgaaaaaccgattaaatttatctctaccggcgaaaaaatggaagcg
cttgacgttttctatcccgaaaggatggccgaccgaattcttggaatgggtgacgttgtt
tcgcttgttgaaagagctcaggagcagtttgatgaggaagaagccaaaaagcttcacaag
aaaatcgccaaaaacgaattcggtttcgacgacttcttaaagcaaatcaatcagatcaag
aaaatgggtaacatgaaggatttgatgggcatgattccgggcgttggaaaagccattaaa
gatgtggatattcaggatgacgcctttaaacatattgaagcgatcatccactcgatgacg
ccggatgaaagaagaagaccttcgattattaatacgcagcgtaaaaatcgcattgcgcgc
ggcgcgggacgcaaaatagaagatgtgaatgcgctgatgaaacagtttgaacagatgggc
aaaatgatgaaaatgatgcagggccctcagggaaaacagatgatggaaatgatgagcaaa
ggaatgccgaaagttccgggaatgggtggcagcccgttcggaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (38)   
   Pfam (38)   
All databases (55)   

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