KEGG   Flavobacterium branchiophilum: FBFL15_1902
Entry
FBFL15_1902       CDS       T01625                                 
Name
(GenBank) Probable DNA polymerase III subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
fbr  Flavobacterium branchiophilum
Pathway
fbr03030  DNA replication
fbr03430  Mismatch repair
fbr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FBFL15_1902
   03430 Mismatch repair
    FBFL15_1902
   03440 Homologous recombination
    FBFL15_1902
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fbr03032]
    FBFL15_1902
   03400 DNA repair and recombination proteins [BR:fbr03400]
    FBFL15_1902
Enzymes [BR:fbr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FBFL15_1902
DNA replication proteins [BR:fbr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FBFL15_1902
DNA repair and recombination proteins [BR:fbr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FBFL15_1902
SSDB
Motif
Pfam: RNase_T GIY-YIG DNA_pol_A_exo1 DEDDh_C RNase_H_2 GIY_YIG_2 Rv2179c-like
Other DBs
NCBI-ProteinID: CCB69951
UniProt: G2Z209
Position
2230767..2232128
AA seq 453 aa
MYAIIDIETTGGQFNEEGITEIAIYKFDGHEIVDQFISLVNPQIPIQPFVVKLTGINNSM
LRGAPKFFEVAKRIIEITEGCIIVAHNASFDYRILRTEFKRLGFDFKAKTLCTVELAKKL
LPEQPSHSLGKLVRALGIPMTDRHRASGDAMATVKLFKMLLDKDLEKIILKELIKTEIIK
GLAPQFLDLIETLPSKTGVYYLHRQDASIMYIGKSKNIKKRVHQHLTGTSNKAKKIQHEI
RNVSFQETGSELIALLKESEEIKINKPIYNRAQRKTIFNWAIYIEKNIDGYNELKLQKTD
GRKREIKAYSSLQEGKDALFRITAQFKLCQKFTGLYETQKECFQYKIKECDGACIGKVTA
NEYNTRVQDFVTAYSFENQNMIIIDKGRKVSERSAVLIENGIYKGYTYYDLNHQIINIDI
LKNILIPMQNNRDTKQIIQNYIKKNSQIKIISF
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtacgcaattatagatatagaaaccaccggtggacaatttaacgaagaaggaattaca
gaaattgccatttataaatttgatgggcatgaaattgtagatcaattcattagtttggtg
aatccacaaataccaattcaaccatttgttgtaaaactaacgggcatcaacaattcgatg
ttgcgaggggcaccaaaattttttgaagtcgctaaacgaatcatcgaaataaccgagggt
tgcattatagtagcccataatgctagttttgattatagaattttacgtacagaatttaaa
agattaggatttgatttcaaagccaaaacattgtgtacagtagaacttgcaaaaaaatta
ttaccagagcaaccctcccatagcttaggcaaattagttagggcattgggcattcctatg
accgataggcatcgggcatctggagatgcaatggctactgtaaaattatttaaaatgctg
ttggacaaggatttagaaaaaataattttaaaagaattaatcaaaacagaaatcataaaa
gggcttgccccacaatttttagaccttatagaaaccttaccttccaaaactggcgtatat
tatttgcaccgacaagatgctagtatcatgtatattggcaaaagtaaaaatataaaaaaa
agagtacaccaacacttaacaggaacgagtaataaagctaaaaaaatacaacatgaaatt
aggaatgtctcttttcaagaaacgggcagcgaacttattgctttattaaaagaaagtgaa
gaaataaaaataaataaaccaatatataatagagcacaacgtaaaactatatttaattgg
gctatttatattgaaaaaaatatagacggatataatgaattaaagttacaaaaaacagac
ggcagaaagcgagaaattaaagcctattcgagtttgcaagaaggcaaagatgctttattt
agaattacggcacaatttaaattatgtcagaaatttactgggctttatgagacgcaaaaa
gaatgttttcaatataaaattaaagaatgtgacggtgcttgtattggcaaagttactgca
aatgagtacaatacaagagtgcaagactttgtaactgcatatagttttgagaatcaaaat
atgattataatagacaaaggcagaaaagtaagcgaacgaagtgctgtattgattgaaaac
gggatatacaaaggctatacgtattatgatttgaatcatcaaataataaatattgatata
ttaaaaaatatcttaatacctatgcaaaataatagagataccaagcaaattattcaaaat
tatatcaaaaaaaacagtcaaataaaaataatatctttttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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