KEGG   Flammeovirgaceae bacterium 311: D770_18300
Entry
D770_18300        CDS       T04058                                 
Symbol
lysS
Name
(GenBank) lysyl-tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
fbt  Flammeovirgaceae bacterium 311
Pathway
fbt00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:fbt00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    D770_18300 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:fbt01007]
    D770_18300 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fbt03016]
    D770_18300 (lysS)
Enzymes [BR:fbt01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     D770_18300 (lysS)
Amino acid related enzymes [BR:fbt01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   D770_18300 (lysS)
Transfer RNA biogenesis [BR:fbt03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    D770_18300 (lysS)
 Prokaryotic type
   Other AARSs
    D770_18300 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d DUF4332 Methyltransf_23 DUF2357
Other DBs
NCBI-ProteinID: AHM61912
UniProt: A0A0D3LJM4
Position
complement(4382022..4383755)
AA seq 577 aa
MHQLSEQEIRRRHEMEELRKLGIEPYPAEGFEVNVTAQDIHENYEKRKTDYKNIAIAGRL
MSTRIMGSASFGEIQDTTGRIQFYIRRDDVAPGEDKTLYNTVFKKLLDIGDIIGIRGHVF
TTQTGEISIHVREFKLLSKSLRPLPIVKREKDEQGVEHVYDAFDDPEQRYRMRYVDLIVN
PHVRETFRKRTQLVQSMRNFLNGRGYLEVETPILQPLYGGAAARPFKTHHNTLDMTLYLR
IANELYLKRLIVGGFDAVYEFAKDFRNEGMSRFHNPEFTQMELYVAYKDYAWMMDLVEEM
VERIAMDLHGDTKVQVGQHTIDFQRPWKRFTMFEAIEHFTGIDISEMDEAGLRNVCKQLH
VPVDESMGKGKLIDEIFGEKCEANLIQPTFITDYPVEMSPLAKRHRDKEGLVERFEAICN
GKEICNAFSELNDPLDQRRRFEEQLELGKRGDEEAMVLDEDFLRSLEFGMPPTAGLGIGI
DRLSMIMTNSNSIQDVLFFPQMRPEKKVQFASDQDYLDQGIRAELIPILRELKVLTIEQL
KNSVPNKLFNDICGTRKKMKLNDVKNPTAEEVEGWIR
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgcatcagttaagcgaacaggaaatcaggcggcgccacgaaatggaagagctccgcaaa
ctgggaattgagccctatcctgccgaagggtttgaggtaaatgtaacggcgcaggatatc
cacgaaaactacgaaaagcgtaaaaccgactataaaaatatagctattgccggccgcctg
atgagcacccgtattatgggatctgcctcctttggcgaaatacaggataccaccggccgc
attcagttctacattcgccgcgatgatgttgctcccggcgaggataaaaccctttacaat
actgtattcaagaaacttctggatattggtgatatcattggcataaggggacatgtattt
accacccaaaccggcgaaatttctattcacgtacgtgagttcaagctgctttccaaatcg
ctgcgcccgctgcctattgtaaagcgcgagaaagacgagcagggcgtagagcacgtatac
gatgctttcgatgatccggaacagcgctaccgcatgcgctatgttgacctgatcgtaaac
ccgcatgtgcgtgaaacattccgcaagcgtacacagctggtgcagtctatgcgcaacttc
ctgaatggccgcggctacctggaggtagaaacacctatcctgcagcccctctatggtggt
gccgccgcaaggccttttaaaacacaccacaatacgctcgatatgaccctgtacctgcgt
attgccaatgagctgtacctcaagcgcctgatcgtaggtgggtttgatgctgtttacgag
tttgccaaagactttcgcaacgagggcatgagccgcttccacaacccggaattcacccag
atggagctgtacgtagcctataaagactatgcctggatgatggacctggtagaggaaatg
gtagaacgcatagccatggacctgcacggcgacaccaaagtacaggtaggccagcacacc
atcgacttccagcgcccctggaaacgctttaccatgtttgaggccattgagcactttaca
ggtatcgatatttcagaaatggatgaggctggcctgcgcaatgtttgtaagcagctgcac
gtgcctgtagatgagagcatgggcaaaggcaaactcatcgacgagatctttggggagaag
tgtgaggccaatctgattcagcctacctttattaccgactaccccgtagaaatgagtccg
ctggccaagcgccaccgcgataaggaaggtctcgtagagcgttttgaagccatctgcaac
ggcaaagagatctgcaacgccttctctgagctaaacgacccgctggatcagcgcaggcgt
tttgaggaacagctggagctgggcaagcgtggtgatgaagaagccatggtgctggatgaa
gactttctgcgttcgctggagtttggcatgccgccaacagccggtctgggcattggcatc
gaccgtcttagcatgatcatgaccaacagcaactccattcaggatgtgctcttcttcccg
caaatgcgtcccgagaaaaaggtgcagtttgcttcagatcaggattacctcgatcagggg
atacgtgctgaattgatccccattttacgtgagctgaaagtgcttacgattgaacagctc
aaaaacagtgttccaaacaagcttttcaacgacatctgcggtacccgcaaaaaaatgaag
ctcaacgacgtaaaaaaccctactgctgaagaggtagagggctggatcagataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (41)   

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