KEGG   Flavobacteriaceae bacterium UJ101: UJ101_00620
Entry
UJ101_00620       CDS       T04720                                 
Symbol
DPO1|polA
Name
(GenBank) DNA-directed DNA polymerase
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
fbu  Flavobacteriaceae bacterium UJ101
Pathway
fbu03030  DNA replication
fbu03410  Base excision repair
fbu03420  Nucleotide excision repair
fbu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fbu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    UJ101_00620 (DPO1|polA)
   03410 Base excision repair
    UJ101_00620 (DPO1|polA)
   03420 Nucleotide excision repair
    UJ101_00620 (DPO1|polA)
   03440 Homologous recombination
    UJ101_00620 (DPO1|polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fbu03032]
    UJ101_00620 (DPO1|polA)
   03400 DNA repair and recombination proteins [BR:fbu03400]
    UJ101_00620 (DPO1|polA)
Enzymes [BR:fbu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     UJ101_00620 (DPO1|polA)
DNA replication proteins [BR:fbu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     UJ101_00620 (DPO1|polA)
DNA repair and recombination proteins [BR:fbu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     UJ101_00620 (DPO1|polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     UJ101_00620 (DPO1|polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_2 HHH_5 RNase_H_2 EF-hand_13 HHH
Other DBs
NCBI-ProteinID: APD06159
UniProt: A0A1J0LKL3
Position
696641..699490
AA seq 949 aa
MTQEHAKNDKRLFLLDAYALIFRGYYAFIKNPRINSKGLNTSAIMGFCNSMIEILKKENP
THIAVVFDVGKSTVRTEQYPEYKANRDETPEAIKIAVPYIQEIIKAFHIPILYKEGYEAD
DVIGTLAKKAEKAGFTTYMMTPDKDFGQLVSENIFMYRPAARGNGPEIWGIPEIQEKFGV
ERPEQVIDFLGMMGDSVDNIPGLPGVGEKTAKKYLAEFGSLENLLAHTDQLKGKAKEKIE
ANKELGILSKQLATIILDVPIEFDEKSLVMDPPDLEKIQEIFQELEFRRMAEQVTRHFSQ
KTANENLKEAFVTQSAPTKTSGKSEQMSLFGNDETSLTLPQETHTGYKTVENSHALYQYV
DTKTGRKLLLEKILQQKEVCFDTETTSLNTFEAEIVGLAISFEKNTGYYITLPENQKETT
SILNEFKPFFEDPTIIKIGHNLKYDLKVLANYQIEVKGNLFDTMIAHYLINPDMRHGMDI
LAETYLNYQPIKIETLIGKKGKNQLSMRDVEIEKQTPYACEDADITLQLKEIFEKKFTEE
IKKLFYDIEMPLMRVLIQMELNGISLDSESLAKLSKELEEDSTLLEKSIYEQAGEEFNIA
SPKQLGPILFEKLAISKKAKKTKTGQYSTSEDVLSKLKNEHSIVANILNYRQVNKLKSTY
VDALPKEVNPKTNRIHTTFGQTVAATGRLSSNNPNLQNIPIRTKRGQEVRKAFIPKDQNH
ILIAADYSQIELRLIAEIAQEPNMTQAFINGEDIHASTAAQIFDVDIKNVTREQRSQAKT
VNFGIIYGVSAFGLSEQTGLSRSDSKKLIDAYYETYPTLKEFMAKQVEFARQQGYVETIL
GRRRYLKDINSSNAVVRSHAERNAINAPIQGSAADIMKLAMIEVQQHLLQENLESKLLLQ
VHDELVLEAPLKEKDALKSNLKNIMEQVVKTQIPLITEVEEGKNWLEAH
NT seq 2850 nt   +upstreamnt  +downstreamnt
atgactcaagaacatgccaaaaatgataaacgcttatttttactcgatgcatacgcctta
attttcagaggttactatgcctttattaaaaatccacgaatcaattcaaaaggattaaat
acctctgctataatgggattttgtaattctatgattgaaatcttaaaaaaagaaaatcct
actcatatagcggtcgtttttgatgttggaaaatctacagttcgaaccgaacaataccct
gaatataaagccaatcgtgatgaaactcctgaggctattaaaatagcagttccctacata
caagaaattataaaagcctttcatattcctatattgtataaagaagggtacgaagcagat
gatgtaattggaactttagctaaaaaagcagaaaaagccggttttacaacctatatgatg
acacctgataaggattttggtcaattagttagtgaaaacatctttatgtatcgacctgca
gcaagaggtaacggtcctgagatatggggtattcctgaaatccaggaaaaatttggagtt
gagcgtcccgaacaagttattgattttttaggtatgatgggggattctgttgataatatt
cccggtttacctggagttggagaaaaaacagccaaaaaatacctagcagaatttggatca
ctagaaaatttattagctcataccgatcaattaaaaggaaaggctaaagaaaaaattgaa
gccaataaagaacttggaatcctttctaaacaacttgctaccattatcttagatgttcct
atcgagtttgatgaaaaatcactcgttatggatcctcctgatttggaaaaaattcaagag
atttttcaagaattagagtttagaagaatggctgaacaagtaacccgtcattttagtcaa
aaaacagctaatgaaaatttaaaagaagcttttgttacccaatcagctcctactaaaaca
tcaggcaaaagcgaacaaatgtctctttttggaaatgatgaaacttctttaaccttacca
caagaaacccatacaggatataaaactgtagaaaattctcatgcattataccagtatgta
gataccaaaacaggtagaaaattacttctagaaaaaatcttacaacaaaaagaagtctgc
tttgataccgaaacaactagtttaaatacttttgaagcagaaattgtagggttagccatt
tcctttgaaaaaaacacaggatattatatcactttacctgaaaatcaaaaagaaacaact
tctattttaaatgaatttaaacctttctttgaagatcctactatcatcaaaataggtcat
aacttaaaatatgatttaaaagtattagccaattatcaaattgaagtaaaaggaaatctt
tttgataccatgattgcacattacctaattaaccctgatatgaggcatgggatggatatc
ttggctgaaacatacttaaattatcaacccattaaaattgaaactttaattggaaaaaaa
gggaaaaatcaactttctatgcgtgatgttgaaattgagaagcaaacaccttatgcatgt
gaagatgctgatattacattacaattaaaagaaatttttgaaaaaaagtttactgaagaa
ataaaaaaactattttatgacattgaaatgcctctcatgcgtgttttaatacagatggaa
ttgaatggtatttcactagattcagaatctttagcaaaattatctaaagaattagaagaa
gatagcacattattagaaaaatctatttacgagcaagctggtgaagaattcaatattgct
tctcctaaacaattaggacctattttatttgaaaaactagccatttctaaaaaggcaaag
aaaaccaaaacagggcaatattctacatcagaagatgtattatcaaaacttaaaaatgaa
cattctattgtagcaaacattttaaattatcgacaagtcaataaattaaaatcaacttat
gtcgatgccttacctaaggaggttaatcctaaaaccaatcgaattcataccacttttgga
caaacggtcgctgcaactggaagattaagttctaataatcctaatttacaaaacataccc
attcgcacaaaacgagggcaagaagtaagaaaagcctttattccaaaagatcaaaatcat
atacttattgcagctgattattctcaaattgaactacgtttaattgctgaaatagctcaa
gaacccaatatgacacaagcttttatcaatggagaggatatccatgcttcaactgctgca
caaatttttgatgttgatattaaaaatgtaacacgtgaacaacgttcacaagccaaaaca
gtaaattttggaattatttatggtgtttctgcttttggattaagtgaacaaacaggttta
tcacgaagtgattccaaaaaactaattgatgcatactatgaaacgtatcctactttaaaa
gaattcatggcaaaacaagtagaatttgctcgacaacaaggttatgttgaaactatttta
ggtagacgtcgttatttaaaggacattaattcttctaacgctgtagttcgaagtcatgcc
gaacgaaatgcaatcaacgctcctattcaaggaagtgctgctgacattatgaagctagct
atgattgaagtacaacaacatcttttacaagaaaatcttgaatcaaagttattattacaa
gtacatgatgaacttgtattagaagcccctttaaaagaaaaagatgccttaaaatctaat
ttgaagaacattatggagcaggttgtgaaaactcaaataccacttattaccgaagttgaa
gaaggtaaaaactggttagaagcacattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (166)   
   KEGG ORTHOLOGY (1)   
   RefGene (163)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (186)   

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