KEGG   Flavobacteriaceae bacterium UJ101: UJ101_01174
Entry
UJ101_01174       CDS       T04720                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
fbu  Flavobacteriaceae bacterium UJ101
Pathway
fbu02020  Two-component system
fbu02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:fbu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    UJ101_01174
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    UJ101_01174
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fbu03021]
    UJ101_01174
Transcription machinery [BR:fbu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     UJ101_01174
SSDB
Motif
Pfam: Sigma54_CBD Sigma54_DBD Sigma54_AID SF3b1
Other DBs
NCBI-ProteinID: APD06698
UniProt: A0A1J0LL26
Position
complement(1329236..1330687)
AA seq 483 aa
MLKQDLYLKLNQKLSPQQIQLMKLVQLPTLAFEERIKQELEENPALEEGHDFTERDEFSN
QEDYQDSERIDASDINIDEYLSDDDMPSYKTYSNNYSADADDTTVPYAGGITLNEYLIGQ
LHTARMSDEDYLIADFLIGSIDGDGYIRRDLKSLSDDLIFTQNLVADEKKLEELLVGYIQ
KLDPVGVGARSLQECLLIQLEAKENTMELRLAKGIVENSFEEFTKKHYQKIMKHFEVDEE
LLKGAIKEIEKLNPKPGKSFSGNTKIVEQITPDFAITIVDGELDLKLNSGNAPELRLSGE
YRNLFEAYKEGDKKNEEQKKAVQFVKQKLDSAKWFIDAVKQRENTLMLAMGAIMRFQEEY
FLTGDEQKIRPMILKDIADEIKMDISTISRVANSKYVSTPYGTLLIKELFSESMTTTSGE
EVSTREIKKILQDAIKEESKKKPLTDEKLSELLKSKGYKVARRTVAKYREQLNIPVARLR
KKL
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgttaaaacaagatttatatttaaagcttaaccaaaagctatctcctcaacagattcag
ttgatgaagctagtacaattacctactttagcttttgaagagcgtataaaacaagaacta
gaggaaaatccagctctagaagaaggacatgattttacagagcgagatgaattttctaat
caagaagattatcaagactctgaacgaattgatgcatctgatattaatattgatgaatat
ttgagtgatgatgatatgccttcttataaaacctattctaataattatagtgcagatgct
gatgatactacagtaccttatgcaggagggatcacattaaatgaatatttaatcggtcaa
ttgcatacagcaaggatgtctgatgaagattatttaattgctgattttttgatagggagt
attgatggagatggttacatacgtcgtgatttaaaatccctttcagatgatttgatattt
actcaaaatttagttgctgatgagaaaaaattagaagagcttttagtaggatatattcag
aagttagatcctgtaggtgtgggagcacgctcgttacaagaatgcttacttattcagtta
gaagctaaagaaaatacaatggagttgcgtttagctaaaggtattgtggaaaattctttt
gaagaatttactaaaaagcattaccaaaaaatcatgaagcattttgaagttgacgaagaa
ttgttgaaaggggctattaaagaaattgaaaaattaaatccaaagccaggaaaatcgttt
tctggaaatacaaaaatagttgagcaaatcacacctgattttgctattaccatcgtagat
ggtgaattagatttgaaattgaatagtggaaatgctcctgaattacgtctgtcaggtgaa
taccgaaatctttttgaagcctataaagaaggagataaaaaaaatgaagagcaaaaaaag
gcagtacaatttgttaaacagaaattagattcagccaaatggtttatcgatgctgtgaag
caacgtgaaaatactttaatgctagctatgggagccattatgcgatttcaagaagaatat
tttttaacgggtgacgagcaaaaaataagacccatgattttgaaagatattgcagatgaa
attaagatggacatttcaactatttcacgggtagcaaatagtaagtacgttagtacccct
tatggaacacttttaattaaagagcttttttcagaaagtatgaccactacaagtggagaa
gaggtttcaacacgtgaaatcaaaaagattttacaagatgctattaaagaagagagtaag
aaaaaacctttaacagatgaaaaattatctgaattattaaaatcaaaaggctacaaagta
gcccgtagaacggtagctaaataccgtgaacagttaaatattcctgttgctagattgaga
aaaaaattataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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