KEGG   Flavobacteriaceae bacterium UJ101: UJ101_01181
Entry
UJ101_01181       CDS       T04720                                 
Name
(GenBank) integration host factor subunit alpha
  KO
K03530  DNA-binding protein HU-beta
Organism
fbu  Flavobacteriaceae bacterium UJ101
Brite
KEGG Orthology (KO) [BR:fbu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fbu03032]
    UJ101_01181
   03036 Chromosome and associated proteins [BR:fbu03036]
    UJ101_01181
   03400 DNA repair and recombination proteins [BR:fbu03400]
    UJ101_01181
DNA replication proteins [BR:fbu03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    UJ101_01181
Chromosome and associated proteins [BR:fbu03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    UJ101_01181
DNA repair and recombination proteins [BR:fbu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      UJ101_01181
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 HU-CCDC81_bac_2 HU-CCDC81_euk_2 PqqD
Other DBs
NCBI-ProteinID: APD06705
UniProt: A0A1J0LKD5
Position
complement(1340160..1340450)
AA seq 96 aa
MTKADIVANISNKFGLEKAETQKIVEEFMAEVKGSLSKGDNVYLRGFGSFIVKTRAEKTG
RNISKNTAVVIPAHNIPAFKPSKTFVNEVKENVPVK
NT seq 291 nt   +upstreamnt  +downstreamnt
atgacaaaagcagacattgttgctaacatttcaaacaagtttggtttggaaaaagcagag
acgcaaaagattgttgaagaattcatggcagaagtaaaagggtctttgtcaaaaggggat
aacgtttatttaagaggctttggaagctttattgtgaaaacaagagctgaaaaaacagga
agaaacatttcaaaaaacacagcagttgtaatacctgctcataatattcctgctttcaag
ccctcaaaaacatttgtaaatgaggtaaaggagaatgttcctgtaaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (56)   

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