KEGG   Felis catus (domestic cat): 101084940
Entry
101084940         CDS       T02385                                 
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X3
  KO
K14328  regulator of nonsense transcripts 3
Organism
fca  Felis catus (domestic cat)
Pathway
fca03013  Nucleocytoplasmic transport
fca03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:fca00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101084940 (UPF3B)
   03015 mRNA surveillance pathway
    101084940 (UPF3B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fca03019]
    101084940 (UPF3B)
Messenger RNA biogenesis [BR:fca03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     101084940 (UPF3B)
   mRNA cycle factors
    P-body specific factors
     101084940 (UPF3B)
SSDB
Motif
Pfam: Smg4_UPF3 RRM_1
Other DBs
NCBI-GeneID: 101084940
NCBI-ProteinID: XP_004000884
EnsemblRapid: ENSFCTG00005001314
UniProt: M3W236
Position
X:complement(97710163..97726022)
AA seq 472 aa
MKEEKDHRPKEKRVTLLTPPGATGSSGGASGDSAKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRVPERDKLKDEPKIKLLKKPEKGDEKELDKREKAKKLDKENLNDER
ASGQSCTLPKRSDGEPKDEKPKRPEDEGGRDYRERERERDYERDQERLLRERERLKRQEE
ERRRQKERYEKEKAFKRKEEEMKKEKEAVRDKGKKPESTESVGSSEKTEKKEEVVKRDRI
RNKDRPAMQLYQPGARSRNRLCPPDDGTKSGDAALEKKQESGISHRKEGGEE
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgaaggaggagaaggatcacaggcctaaagagaaacgagtaaccctgttgactcccccg
ggggccacgggcagcagcggtggagcttcgggggacagcgccaaaggggaagataagcag
gatcgaaataaggagaagaaggaggcgctgagcaaggtggtcattcggagattacctccc
actttgaccaaggagcagcttcaggaacatcttcagcctatgccggagcatgattatttt
gagtttttttctaatgatactagtctgtatcctcatatgtatgccagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaggaatatcctgccatagtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagataccaaagttgggactatcgatgatgatccagaatat
aggaaatttttggaaagttatgctgcagataatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagcaaaaaatagagaattaatagctaaaaagacaaccccactt
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaaaagagaagaaagaaggagg
cgagaaatagaaagaaaaagacaaagagaagaagagaggaggaagtggaaggaagaagaa
aaacgaaaaaggaaagatatagaaaagctaaagaagatagacagagttccagaaagggac
aaattaaaggacgaaccaaagataaagctactcaagaagccagaaaagggagatgaaaaa
gaattagacaaaagagaaaaagccaagaaactagacaaagagaatctgaatgatgaaaga
gccagcgggcaaagttgcacactgcccaagcgctctgacggcgagcctaaagacgaaaag
cctaagaggcccgaagacgagggcggccgagactaccgggagcgggagcgggagcgggac
tacgagcgggaccaagagcgcctcctgcgggagagggagaggctgaagcggcaggaagag
gagcgccgcaggcagaaggagcgttatgagaaggagaaggcttttaagaggaaggaagag
gaaatgaaaaaagagaaagaagcggttcgggacaaaggaaagaagccggaaagtaccgaa
tccgtaggcagctccgaaaaaactgaaaagaaagaggaagtggttaagagagatcgcata
agaaacaaggatcgcccggcaatgcagctttaccagccaggagctcgaagccgaaaccga
ctctgtccgcctgatgacggcaccaagtctggagatgcggcgctagaaaagaagcaggaa
agtggtattagccataggaaagaaggaggagaggagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (32)   

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