KEGG   Felis catus (domestic cat): 111556173
Entry
111556173         CDS       T02385                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DM beta chain isoform X1
  KO
K06752  MHC class II antigen
Organism
fca  Felis catus (domestic cat)
Pathway
fca04145  Phagosome
fca04514  Cell adhesion molecules
fca04612  Antigen processing and presentation
fca04640  Hematopoietic cell lineage
fca04658  Th1 and Th2 cell differentiation
fca04659  Th17 cell differentiation
fca04672  Intestinal immune network for IgA production
fca04940  Type I diabetes mellitus
fca05140  Leishmaniasis
fca05145  Toxoplasmosis
fca05150  Staphylococcus aureus infection
fca05152  Tuberculosis
fca05164  Influenza A
fca05166  Human T-cell leukemia virus 1 infection
fca05168  Herpes simplex virus 1 infection
fca05169  Epstein-Barr virus infection
fca05310  Asthma
fca05320  Autoimmune thyroid disease
fca05321  Inflammatory bowel disease
fca05322  Systemic lupus erythematosus
fca05323  Rheumatoid arthritis
fca05330  Allograft rejection
fca05332  Graft-versus-host disease
fca05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:fca00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    111556173
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    111556173
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    111556173
   04612 Antigen processing and presentation
    111556173
   04658 Th1 and Th2 cell differentiation
    111556173
   04659 Th17 cell differentiation
    111556173
   04672 Intestinal immune network for IgA production
    111556173
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    111556173
   05164 Influenza A
    111556173
   05168 Herpes simplex virus 1 infection
    111556173
   05169 Epstein-Barr virus infection
    111556173
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    111556173
   05152 Tuberculosis
    111556173
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    111556173
   05140 Leishmaniasis
    111556173
  09163 Immune disease
   05310 Asthma
    111556173
   05322 Systemic lupus erythematosus
    111556173
   05323 Rheumatoid arthritis
    111556173
   05320 Autoimmune thyroid disease
    111556173
   05321 Inflammatory bowel disease
    111556173
   05330 Allograft rejection
    111556173
   05332 Graft-versus-host disease
    111556173
  09166 Cardiovascular disease
   05416 Viral myocarditis
    111556173
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    111556173
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fca04147]
    111556173
Exosome [BR:fca04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111556173
  Exosomal proteins of epithelial cells
   111556173
  Exosomal proteins of breast milk
   111556173
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_3 Ig_2 SPARK C2-set_2 I-set
Other DBs
NCBI-GeneID: 111556173
NCBI-ProteinID: XP_006931668
EnsemblRapid: ENSFCTG00005031328
UniProt: M3WBW8
Position
B2:complement(31835308..31841121)
AA seq 263 aa
MNTLLPLLLGLSLGSTRAGGFLAHVESTCLLDDDGTPKDFTYCVSFNKDLLTCWDPQTSQ
MAPCEFGVLSVLANYLSDYLNQQESLLQRLSNGLQDCATHTQSFWGSLTHRTRPPTVQVA
KTTPFNTKERVMLACYVWGFYPADVNISWRKNGQPVLPHRSAPKMAQPNGDWTYQTVSHL
ATTPSFGDTYTCVVDHIGALEPICEDWTPGLSPMQTLKVSVAAVTLGLGLIIFSLGLLSW
RKASSSGYIFLPGSSYPEGQHIS
NT seq 792 nt   +upstreamnt  +downstreamnt
atgaacacactcctgccgttgctgctaggcctcagcctgggctccaccagagcaggtggc
tttttagcccatgtggaaagcacctgtctgttggatgatgatgggactccaaaggatttc
acatattgtgtctccttcaacaaggatttgctgacctgctgggatcctcaaacatcccaa
atggccccttgtgaatttggggtactgagtgtcttggcgaattacctctcagattacctc
aaccaacaggaaagcctactccagcgcttgtctaatgggctccaggactgtgccacacac
acccagtccttctggggatcactgacccacaggacacggccaccaactgtgcaggtagcc
aaaaccactccttttaacacgaaggagcgtgtgatgctggcctgctacgtgtggggcttc
tatccagctgatgtgaatatctcatggaggaagaatgggcagcctgtcctccctcacaga
agtgcccctaagatggctcagcccaatggagactggacgtatcagaccgtctctcattta
gccacaactccctctttcggggacacctacacctgcgtggtggatcacatcggggctctt
gagcccatctgcgaggactggacgcctgggctgtccccgatgcagacactgaaggtttcg
gtggctgcagtgactctgggcctgggcctcatcattttctctcttggtttgctcagctgg
cggaaagctagctcctctggctacattttcctccctgggtccagttatccagaaggtcaa
cacatctcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (24)   
   KEGG PATHWAY (24)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (49)   

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