KEGG   Folsomia candida: 110847932
Entry
110847932         CDS       T05043                                 
Name
(RefSeq) polyadenylate-binding protein 4-like
  KO
K13126  polyadenylate-binding protein
Organism
fcd  Folsomia candida
Pathway
fcd03015  mRNA surveillance pathway
fcd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fcd00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110847932
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110847932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fcd03019]
    110847932
   03041 Spliceosome [BR:fcd03041]
    110847932
Messenger RNA biogenesis [BR:fcd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     110847932
   mRNA cycle factors
    Stress granule specific factors
     110847932
Spliceosome [BR:fcd03041]
 Complex C
  Other components
   Complex C specific factors
    110847932
SSDB
Motif
Pfam: RRM_1 PABP RRM_occluded RRM_7 RRM_5 RRM_3
Other DBs
NCBI-GeneID: 110847932
NCBI-ProteinID: XP_021950672
Position
Unknown
AA seq 631 aa
MQAAAQPNYPMTSLYVGDLHPDVTEAMLFEKFSQTGPVLSIRVCRDMITRRSLGYAYVNF
QQPADAERAMDTMNFDLMKKGRPIRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKDMYDT
FSTFGTILSCKVATDEHGNSKGYGFVHFETEEAANKAIDKVNGMLLSDKKLYVGRFIPRK
EREKELGEKAKRFTNVYIKNFPDGLGEEKLRDLFESFGKITSYKVMSDETGKSRCFGFVA
FEDAEAAEEAVNQLNGKEMDGKTVYVGRAQKKNERQQELRRKFEQLKMERLNRYQGVNLY
VKNLDDTIDDEKIRKEFAPYGTITSAKVMIEEGRSKGFGFVCFSSPEEATKAVTEMNGRI
VGSKPLYVALAQRKEDRKAHLTSQYMQRMVNMSSIRMPQMGQVYNPGSYFMPTIPQPQRF
YAPAQMGLRPSPRWPTAQARPAGQVPAFAMQPPFRAPRGAVAGAGQPLRALGRMPGPQNV
PGGPQPRAIGNGPQQMAAAAAAAAGQQPRGPTTQAPPAYKYQSSAMRTPGQPSGVVITGQ
EPLSASALAAAHPNDQKQMLGERLFPLIHEKYPTVAGKITGMLLEMDNSEILHLLDDRDL
LSSRVEEAVAVLQMHQTKQPSMPQQPTAAAN
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgcaggccgcggctcaaccaaattatccgatgacttcgctctacgtgggtgatcttcac
ccagatgtaacggaagctatgctgtttgaaaaattttcccaaaccggaccggtcctttcc
attcgtgtttgccgtgacatgatcacccgtcgttcgctgggctatgcctatgtcaacttt
caacaacctgcggatgcggaacgagcaatggacacgatgaattttgacttgatgaagaag
gggagacccatcaggattatgtggtcgcaacgagatccatcccttcggaaatctggagtt
gggaatattttcatcaagaacttggacaagtcaatcgacaataaagatatgtacgatacg
ttcagtacatttggcactattctgagttgtaaggttgcaacagacgagcacggaaattca
aaaggctacggattcgtacacttcgagaccgaagaggctgcaaacaaagccattgataaa
gttaatggaatgcttctcagtgacaagaaactatacgttgggagattcattccacggaaa
gaacgcgaaaaggaacttggagagaaggcaaagcggttcacgaatgtctacattaagaat
ttccctgatgggctgggagaagaaaaattgagagatcttttcgaatcttttggaaagatt
acatcgtacaaggtgatgtcagatgaaacgggcaagtcccgatgctttggatttgttgca
tttgaagatgctgaagctgctgaagaagccgtgaatcagcttaatggcaaggaaatggat
ggcaagaccgtgtatgtggggcgtgctcaaaagaagaatgaacggcaacaggagctgaga
cgcaagtttgagcagttgaagatggagcggctcaatcgctaccagggtgttaacctatat
gtgaagaacttggatgacacgattgatgacgagaagatccgcaaggaatttgctccatat
ggtactattacgtccgcgaaggttatgattgaggaaggacggtccaagggtttcggattc
gtgtgcttctcatctccggaggaggctaccaaggccgtcactgagatgaatgggcgaatt
gttggctctaagcccttgtatgtggcactcgctcagcgtaaagaagaccgaaaggctcac
cttacgtcgcagtatatgcagcggatggtgaacatgagttccatccgaatgccacaaatg
ggacaagtttacaatcctggcagctactttatgccaacaatcccacaaccccagaggttc
tatgctcccgcacaaatgggactgcgtccttcgccaaggtggccaacagctcaggcccgc
cctgcggggcaagttccagccttcgcaatgcagccaccattccgcgctcctcgtggagca
gttgctggtgctggacagcctctgcgagctcttggacgaatgccaggaccacaaaacgtt
ccaggtggcccacaaccaagagcaattggcaatggtccacaacaaatggccgccgctgct
gctgctgctgcaggtcaacaaccccgcggcccaacgacccaagcaccacctgcatacaag
taccagtcgtctgctatgcgtactccaggacaaccctccggagtggtcatcacaggacaa
gaaccgttgtcggcttcggcattggctgctgctcatcccaacgaccaaaaacaaatgcta
ggagaacgattgttcccactcattcatgaaaagtatccaactgtcgctggaaaaatcact
ggaatgttgttggagatggacaactctgaaatcttgcatttgttggacgatcgcgacttg
ctgagctctcgggtcgaagaagctgttgcggtcttgcagatgcaccaaaccaagcaacct
tcgatgcctcaacagccaactgcggctgccaactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (191)   
   KEGG ORTHOLOGY (1)   
   RefGene (187)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (205)   

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