KEGG   Folsomia candida: 110855890
Entry
110855890         CDS       T05043                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
fcd  Folsomia candida
Pathway
fcd03020  RNA polymerase
fcd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fcd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110855890
  09124 Replication and repair
   03420 Nucleotide excision repair
    110855890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fcd03021]
    110855890
   03400 DNA repair and recombination proteins [BR:fcd03400]
    110855890
Enzymes [BR:fcd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     110855890
Transcription machinery [BR:fcd03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     110855890
DNA repair and recombination proteins [BR:fcd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110855890
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 110855890
NCBI-ProteinID: XP_021959992
Position
Unknown
AA seq 1169 aa
MYDPEDEGEEEGASAELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVEDSPV
VDLQAEAQHMGGEVDTPARYVLRFEQIYLSKPTHWEKDGAPSAMMPNEARLRNLTYSAPL
YVDITKTVVREETVKVPHPKTFIGKIPIMLRSTYCILSGLSDRDLTELNECPLDPGGYFV
VNGSEKVLIAQEKMATNTVYVFSMKDSKYAYKAEIRSCLEHSSRPTSTLWVNMMSRGGQT
MKKTSIGQKIIAVIPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEMVKPSLD
EAFVVQEQNVALNFIGARGAKPGVTREKRIRYAKEILQKEMLPHVGVSDFCETKKAYFLG
YMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLTKEIRMYAQKFIDKG
KDFNLELAIKTRIITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVN
SPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSPILEFLE
EWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMTTLRKLRRQMDIIVSEVSMVRD
IRDREIRIYTDAGRICRPLLIVENGKLLLKKRHIDMLKEREYNNYGWQDLVARGVVEYID
TMEEETVMITMNPDDLTQDQRYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQSPRNTYQ
SAMGKQAMGVYITNYHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIACY
TGYNQEDSVILNASAVDRGFFRSVFFRSYKDQESKRIGDQEEQFEKPQRHSCQGMRNAIY
DKLDNDGIIAPGVRVSGDDVIIGKTITLPETEDEFQEANRRYVKRDASTFLRNSETGIVD
QVMITLNAEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGIAPDI
IINPHAIPSRMTIGHLIECLQGKVSSNKGEIGDATPFNDAVNVQKISNILQEYGYQLRGN
EILYCGHTGRKINAHTFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRARDGGLR
FGEMERDCQISHGAAQFLRERLFEVSDPYRIHICDLCGLIAIANLRSKTFECRGCKNKTQ
ISQVRLPYAAKLLFQELMSMNIAPRLMVL
NT seq 3510 nt   +upstreamnt  +downstreamnt
atgtacgatccggaggatgagggagaagaggagggagcttcagccgagttgtggcaggag
gcctgttggatcgttatcaatgcgtatttcgatgaaaaaggtctcgtccggcagcagctc
gactcctttgatgagtttattcaaatgtcggtgcaaagaattgtggaggactcgcccgta
gtggacttacaagctgaggcacagcacatggggggagaagtggatacgccggcgcgctat
gttctcagatttgagcagatctatctctccaagccgactcattgggagaaggacggcgcc
ccctcagctatgatgcctaatgaggcgagattgcgaaacctgacatattctgctccccta
tacgtagacattaccaagacagtcgtgagggaggagacggtaaaagttccacatccgaag
acgttcattgggaaaattcctatcatgttgaggtcgacttactgcatcttgagtggtctt
tcggatcgagatcttacagagttgaatgaatgtccgttggatccgggtggttattttgta
gttaatggatctgaaaaggttttaatcgctcaagagaaaatggcgacaaacacggtctac
gtgttcagtatgaaggactccaagtatgcgtacaaagctgaaatcagatcttgtctggag
cactcgtctcggccaactagcacactctgggtgaacatgatgtctcgcggtggacaaacg
atgaaaaagacgtccatcggacagaagattattgcagtaattccctatatcaagcaggaa
attcctatcatgatcgtctttcgagctttgggcttcgtggcggatcgcgatatcttagaa
cacatcatctacgattttgacgacccggaaatgatggagatggtcaagccctcgctggat
gaggcgttcgtggtccaagaacaaaatgtggctttaaactttatcggtgcaagaggggcg
aaacccggagtgacacgtgagaagcgtattcgatatgcgaaagaaatcctccaaaaggaa
atgttgcctcacgtcggtgtctcagacttttgtgaaactaagaaggcctactttttgggc
tacatggtccatcgcctccttctagctgcacttggccgacgagagttggatgatcgagat
cactacgggaataagcgtctcgatttagctggtccactcttggcttttctgtttagagga
ctgttcaagaacctgactaaagaaatcagaatgtatgcacaaaagtttatcgataaaggg
aaagactttaatctggaactcgccatcaagacgagaatcatcactgatggacttaaatac
tcattggccactggtaattggggtgatcaaaagaaggcccatcaagccagagcaggcgtg
tcacaggtgttgaaccgactcacttttgcctctactttatctcacttgcgtcgcgtaaac
agtccaattggtcgcgacgggaagttggcgaagccacgtcaattacataatacattatgg
ggaatgatctgtcctgccgaaactccagaaggggcggccgttggtctagtcaagaatctg
gctttgatggcctacatttctgtggggtcacaacccagcccaattctcgagttcttggag
gagtggtcaatggagaatttagaagaaattgcgccttcagccattgccgatgccactaaa
atctttgtcaacggttgctgggtcggcatacatcgagaccctgaacagttgatgacaact
ctgcgaaagctacgtcgccaaatggacatcatcgtctctgaagtatcaatggttcgtgac
attcgtgatcgtgaaattcgaatttacaccgacgctggtagaatttgtcgtccccttctg
attgttgagaatgggaagttgctgctcaaaaaacgccacattgatatgttaaaggagcga
gaatacaataattacggttggcaagatctggtggctcgaggagtagtcgagtacatcgac
actatggaagaagagacagtgatgattaccatgaatcccgatgatttaactcaagaccag
cggtacgcgtattgtaccacgtacacacattgtgaaattcacccagccatgattttgggt
gtttgcgcttccatcattccgtttcctgatcacaatcagtctcctcgtaacacttaccaa
agtgctatgggtaaacaagccatgggagtttacattacgaattaccacgtgcggatggac
accctcgcccacgtcctctactacccacaaaagcctcttgtaactactcgatccatggag
tacctccggttcagagagcttccagccggaataaacagcattgtcgcgatcgcctgttac
accgggtacaatcaggaggactctgttattctcaatgcgtcggcagtggatcgaggcttt
ttcagatctgtattcttccggtcttacaaagatcaggaatctaagcgaattggggaccag
gaagagcaatttgaaaagccgcagcgccatagctgtcaagggatgagaaatgcaatttac
gacaaattggataacgacggaatcatcgcgcctggcgttcgcgtctctggggatgatgtg
attatcggtaaaactattactctccccgaaacggaggacgaattccaagaagcaaatcgt
cgctatgtgaaacgagacgcgtccacatttctacgaaactcagaaaccggtatcgtcgat
caggttatgatcactttgaatgctgaaggctacaaattttgtaagattcgcgtccgttcg
gtgcgtatccctcaaattggagacaagtttgcttctcggcatgggcaaaagggaacatgt
ggtattcaatatcggcaagaggacatgccgttcacttgtgaggggatagcacccgatata
ataatcaatcctcacgccatcccgtctcggatgacaatcggccatttgatcgagtgtctc
caggggaaggtgtcatcaaacaaaggagaaatcggggacgccacccctttcaacgatgcc
gtcaacgtccaaaagatctcaaatattctccaggaatatggctatcagctccgaggaaat
gagatcctgtattgtggtcatacagggagaaaaatcaatgctcataccttcttgggccca
acctattatcaaagacttaagcacatggtggacgataagattcactcgagagctagagga
ccagtccagatccttgtgcgtcaacccatggagggccgagctcgtgatggtggtctccga
ttcggtgagatggaacgggattgccagatttctcatggagctgcccagtttttgagggag
cgcttattcgaggtctcggatccgtaccgaattcatatttgtgatctatgtggacttatt
gccattgctaatctgcgaagtaagacgttcgagtgtcggggttgtaaaaataagacacag
atttctcaagtccgacttccctacgcagccaaacttctcttccaagagttgatgtcgatg
aacatcgcccctcgtctgatggtgttataa

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