KEGG   Folsomia candida: 110858152
Entry
110858152         CDS       T05043                                 
Name
(RefSeq) protein PAT1 homolog 1-like
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
fcd  Folsomia candida
Pathway
fcd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fcd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110858152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fcd03019]
    110858152
Messenger RNA biogenesis [BR:fcd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110858152
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     110858152
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 110858152
NCBI-ProteinID: XP_021962522
Position
Unknown
AA seq 818 aa
MDETGDWVPPEDEYDALNDETFGDDSGTEFNWDEAQLMLDDFEKIKPNGASKLVSSEHEN
QVEFGGHHEDHHSFEEKGLGGNSKTFEDDFDNENALAESISRLMDDFDDDDEAEAMKSKL
RRLGGGGGGSLNTYFLPPQVANKHHQWIGGNSSLLGSSVWSMHPTTSTPDTDHVPAPSNH
HHNAVNVRVAADHRPPLHFTDQFSHPTPPQSKLNDLSTRSPKSQPPAKPVFKTVEEIERE
LLEGSGGDTLPPPPPPSTGATTKSTNHHHPLIMTAEELERQLMDDSSSPSPLQPVPSSPL
KQQQQQYHSIPPGMTTDNNGLRHGGSPSSSSSQKGSPRPPPGLNVNQLMILQQQQQRKQH
ATPPPHMAGPGPHPFSPRNRMMMNPAQMHHHHQQVQFALHQQQQHMRMMQQMSPQMRSRM
PPHMMLPFPPPPSNMHHPGRQGNFPGMGPPHQQHQMPPHFMRHFRSDDPYSGLMNEKDKQ
RLRNISIVQLQNDHPYTTDYYSLMYRVRRGTSDPKRQRDCLIKLFPNKSDDSSGRNNYQP
AHFENSLGKLQAVSALAPKKAIDTVIRVVDAGQSNRGGMKAYRYLLLEIEKLYECLLKIQ
EGDIRKTLLMNADAYTLQQRNENERKVKTVLLPQNKLAEILSVHKGKMLISRLMPLLDPE
FRFQLLSHMITNFPDWGASKNSDIDRTYPFLRHCIISADMKDLIFAFNGIVPTAVYECMI
TSKLGISLLMAAFHRGESIIQTSLPDDERVAYLNRLYIKEVDVLVQTVLRSLHLLATPIE
YPVHIIQHFARWGPQSDQLLQFESTLDLWAKEGSLVLH
NT seq 2457 nt   +upstreamnt  +downstreamnt
atggacgagacgggcgactgggttcccccagaagatgagtatgacgccctcaacgatgaa
acctttggggacgatagcggcacagaattcaactgggacgaggctcaattgatgctggac
gattttgaaaagatcaaaccgaacggagcatcaaaattggtatcgtctgagcatgaaaac
caggttgaattcggcggtcatcatgaggaccaccacagtttcgaagagaaaggcttggga
ggaaatagtaagacttttgaggacgatttcgacaacgaaaatgccctcgcggaaagcata
tctcgactcatggatgatttcgacgatgacgatgaggcagaagctatgaaatccaagttg
cgaagattaggtgggggtgggggtggcagtttaaatacgtacttccttccgccacaggtc
gcgaacaagcatcatcaatggattggtgggaattcttctttgttgggatcgtcagtctgg
tccatgcacccgacgacctctacgcccgacacggatcacgtacctgctccttcaaatcat
caccataacgctgtcaatgttagagttgccgcagaccaccgacctccacttcactttact
gaccaattctcccatccaacacctcctcaaagcaagctgaacgacttatctacacggtcg
cccaaatcacaaccacccgcaaaaccggtttttaaaactgtagaggaaatagagcgtgag
cttctcgaggggagtggaggtgacactcttccacctcctcctcctcctagtactggtgcc
actacaaaatctacaaatcatcaccatcccctcatcatgacggcggaagagttggaacgt
caactaatggacgattcttcctccccatcacccctgcaacctgtaccttcctccccgcta
aagcagcagcagcagcagtatcactccataccgcctggaatgacgacggataataatggt
ctgcgacacgggggaagtccttcctcttcttcgtcgcaaaagggtagtccccgacctccc
ccaggattgaatgtgaatcaattaatgatcctacagcagcaacagcaaaggaagcagcat
gccactccacctccgcacatggctggaccaggaccgcacccattttccccaagaaatagg
atgatgatgaaccctgcacaaatgcatcaccaccaccaacaagtacaatttgctcttcat
caacagcaacaacacatgcgaatgatgcaacagatgagtccacaaatgaggagtaggatg
ccgccacatatgatgctcccatttccaccaccgccatctaacatgcatcatccaggccgg
cagggtaatttccctggaatggggccaccccaccaacagcaccaaatgccgcctcacttt
atgcgccacttccgttcggatgatccctactctgggttgatgaatgagaaggataaacaa
agacttagaaatatttcgatagtccaattgcaaaatgaccacccgtacacgacggattat
tactcgttgatgtaccgtgtacgacgtggaacctctgatccgaaaagacagcgagactgc
ctcataaaactatttccaaataagtctgacgactcctcgggtagaaataattatcaaccg
gcacattttgaaaattcgttaggaaagttacaggccgtaagtgcgttagccccaaagaag
gcgatcgatacggttattcgggttgtagatgcgggtcaaagtaatcgcggtgggatgaag
gcgtatcgatatctacttttagaaattgaaaagttgtacgaatgtttgctgaaaatccag
gagggcgacattaggaaaactttgctcatgaatgccgacgcgtacacgttgcaacaacgg
aacgagaatgagcggaaagttaaaacagttttactcccgcagaataaactcgccgaaatt
ttgtctgtccacaagggcaagatgctaatcagccgcctgatgcctctactcgatccagag
ttccgcttccaacttttgtcccacatgattacaaactttccggattggggagcctctaaa
aattccgatatcgaccggacctaccctttcctgcgacattgcatcatttccgccgacatg
aaagacctcatcttcgcgtttaacgggatcgtccccacagctgtgtacgagtgcatgata
accagcaagttggggatttccctcctcatggcggcgtttcatcgaggcgagtccattatt
cagacgagcctgccggacgacgagagagttgcgtacttgaatcggttatacataaaagag
gtcgacgtcctggtacagaccgtgctgagaagtctgcaccttctcgcgacacccatcgaa
tacccggtccatatcatccaacatttcgccaggtggggcccccagtcggatcagctcctg
cagtttgagtcgaccctcgacctctgggcgaaagagggcagtttagtccttcattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (55)   

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