KEGG   Frederiksenia canicola: A4G17_03065
Entry
A4G17_03065       CDS       T06481                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
fcl  Frederiksenia canicola
Pathway
fcl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:fcl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    A4G17_03065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fcl03021]
    A4G17_03065
   03400 DNA repair and recombination proteins [BR:fcl03400]
    A4G17_03065
Enzymes [BR:fcl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     A4G17_03065
Transcription machinery [BR:fcl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     A4G17_03065
DNA repair and recombination proteins [BR:fcl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      A4G17_03065
SSDB
Motif
Pfam: RNA_pol_Rpb6 Med9 DUF4426
Other DBs
NCBI-ProteinID: QIM64498
Position
complement(623818..624099)
AA seq 93 aa
MARVTVQDAVDKIGNRFDLILTAARRARQLQLHTRDPLVAEEGDKPTVIALREIEEGLIN
NQIMDQQENIEMLRQEIAEKEAISFLADVQANS
NT seq 282 nt   +upstreamnt  +downstreamnt
atggctcgtgtaacggttcaagacgcagtagataaaattggcaaccgctttgatttaatt
ttaacggcagctcgccgtgcaagacaattacagcttcacacgcgtgacccgttggttgcc
gaagaaggcgataaaccaaccgtgattgcgttgcgtgagattgaagaaggcttgatcaac
aatcaaattatggatcagcaagaaaacattgaaatgcttcgccaagaaattgccgaaaaa
gaagccatttcattccttgctgatgttcaagcaaattcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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