KEGG   Frederiksenia canicola: A4G17_08935
Entry
A4G17_08935       CDS       T06481                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
fcl  Frederiksenia canicola
Brite
KEGG Orthology (KO) [BR:fcl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fcl03009]
    A4G17_08935
   03016 Transfer RNA biogenesis [BR:fcl03016]
    A4G17_08935
Enzymes [BR:fcl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     A4G17_08935
    5.4.99.29  23S rRNA pseudouridine746 synthase
     A4G17_08935
Ribosome biogenesis [BR:fcl03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    A4G17_08935
Transfer RNA biogenesis [BR:fcl03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    A4G17_08935
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: QIM65556
Position
complement(1893639..1894262)
AA seq 207 aa
MDHQFPIIYRHTDFVIINKPAGVSVHRDEQAVGLTEKLAKQLGVDQVWLVHRLDKLTSGL
LILALNKTAAATFYRLFEAHQIQKTYWAISTQKPKKKQGSIIGDMVKSRNGAWKLCQTRH
HPAITQFISYAIAPKLRQFILQPKTGKTHQLRVAMKSLGSPILGDQLYRGEAADRLYLHA
YQLDFIYDGEPISVSVEPTGQDWDVKR
NT seq 624 nt   +upstreamnt  +downstreamnt
atggatcatcaatttccgattatttaccgtcatacggattttgtcattatcaataaacct
gctggtgtgagtgtgcatcgagatgaacaagcggttggtttaaccgaaaaacttgcaaag
caacttggcgttgaccaagtatggttagtgcatcgcttagataaacttacctcgggtttg
ttgattctagccttaaataaaacagctgcagcgaccttttatcgtctttttgaagcacat
caaattcaaaaaacttactgggcaatctcaacccaaaaaccaaagaagaagcagggaagt
attatcggggatatggtgaaaagccgtaatggggcatggaaattgtgtcaaacgcgtcat
caccctgcgattactcagtttatatcttatgctattgcgccgaagttacgccagtttatt
ctacaaccgaaaacaggtaagacacatcaattaagagtagcaatgaaaagtctcggcagt
ccaattttaggggatcagctttatcgtggagaagcggcggatcgattgtatttgcatgcc
tatcaactcgattttatctatgatggtgagccaatatccgtttcagttgagccaacgggg
caagattgggatgtgaaaaggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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