KEGG   Flavobacterium commune: BIW12_14090
Entry
BIW12_14090       CDS       T05006                                 
Name
(GenBank) Clp protease ClpC
  KO
K03696  ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
fcm  Flavobacterium commune
Brite
KEGG Orthology (KO) [BR:fcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:fcm03110]
    BIW12_14090
Chaperones and folding catalysts [BR:fcm03110]
 Heat shock proteins
  HSP100
   BIW12_14090
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 ClpB_D2-small AAA Clp_N AAA_5 Sigma54_activat AAA_16 nSTAND3 AAA_22 AAA_18 TniB AAA_7 AAA_14 RuvB_N IstB_IS21 AAA_3 Zeta_toxin UVR RsgA_GTPase ATPase_2 DUF815 Torsin Roc DNA_pol3_delta2 bpMoxR TsaE AAA_25 KTI12 DUF87 Ferritin CENPH
Other DBs
NCBI-ProteinID: APA00461
UniProt: A0A1D9PCZ1
Position
complement(3400891..3403440)
AA seq 849 aa
MDDNFSPRVKDVITYSKEEALRLGHDFIGTEHLMLGILRDGNGKAIQILNSLSIDLDHLR
RKVEILSPAIPGIDSNLEKKNLHLTRQAERALKTTFLEAKVFQSPSVSTAHLLLCILRNE
NDPTTKLLNKLKIDYDVAKEQYLNMTPSEEEFLENLPRATDSYNDDLGQDDSLKEGNFNN
PANKSNKKSKTPVLDNFGRDLTEMAEEGKLDPVVGREKEIERVCQILSRRKKNNPLLIGE
PGVGKSAIAEGLALRIIQKKVSRILFNKRVVTLDLASLVAGTKYRGQFEERMKAVMNELE
KNDDIILFIDEIHTIVGAGGATGSLDASNMFKPALARGEIQCIGATTLDEYRQYIEKDGA
LERRFQKIIVEPTTVEETITILNNVKNKYEDHHNVTYTPEAIEACVKLTNRYMSERFLPD
KAIDAMDEAGSRVHITNIEVPKKILDLERQLEEIRDLKNAVVKKQKYEEAAKLRDDEKRI
EKDLAIAQEQWEEDAKSNRIQVTEDNVADVVSMMTGIPVNRIAQTESNKLAKLPELIESK
VIGQKEAVIKIARSIQRNRAGLKDPNRPIGSFIFLGQTGVGKTQLAKVLAKELFDSEDAL
VRIDMSEYMEKFAISRLIGAPPGYVGYEEGGQLTEKVRRKPYAVVLLDEIEKAHPDVFNM
LLQVLDDGYLTDSLGRKIDFKNTIIIMTSNVGARQLKDFGQGVGFGTAAKVAQADDNSKS
IIENALKKTFAPEFLNRIDDVIVFNALEKTDIDLIIEIELKKLYARIAELGYNLNLSDKA
KAFIAEKGFDKQFGARPLKRAIQKYVEDTLAEEIITSKITAGDEIFMDIEDGSQELTVKI
HKTGEATNL
NT seq 2550 nt   +upstreamnt  +downstreamnt
atggatgataatttttcaccaagggtaaaagatgttattacctacagtaaagaagaggct
ttacgattaggtcatgacttcattgggactgaacacttgatgcttggtatccttagagat
ggtaatggtaaagcaatacagatattaaacagtttgtctattgatttagaccatttacgc
cgaaaggtagaaatcctaagcccagcaatcccgggaatagatagtaatttagaaaagaaa
aatctgcatttgactcgtcaggcggagcgtgctctgaaaacaacctttttggaagccaaa
gttttccagagtccatcagtaagcacagctcatttattactatgtatattaagaaacgaa
aacgatcctacaaccaagctattgaataaactaaaaatagattatgacgtagccaaagaa
caatatctaaatatgacaccaagcgaagaagaattcttagaaaacttaccaagagctaca
gactcttacaatgacgatttaggacaagatgacagtttaaaagaaggtaacttcaacaat
cctgcaaataagtctaacaagaaatctaaaacccctgttttggacaacttcggtagagac
ttaaccgaaatggcagaagaaggaaaactggatcctgttgtaggacgcgaaaaagaaata
gaacgtgtttgtcaaattctaagccgtcgcaaaaaaaacaacccattattaattggtgaa
ccgggagttgggaaatcagccattgccgaaggcttagcattgcgtattatccaaaagaaa
gtatcccgtattcttttcaataaacgtgttgttaccttagatttagcaagcttagttgcc
ggtactaaataccgcggtcagtttgaggaacgcatgaaagccgtgatgaacgaattagaa
aaaaatgacgacatcattcttttcattgacgaaattcacactatcgtaggagctggtggc
gctactggatcattagatgcttccaacatgttcaaacctgctttagccagaggtgaaatc
caatgtattggtgcaacaacactagatgaatacagacagtacatcgaaaaagatggtgct
ttagaaagacgttttcaaaaaattattgtagaacctactactgtagaagaaacaattacc
attttgaacaatgttaaaaacaaatacgaagatcaccacaatgttacttacactccagaa
gctattgaagcctgtgtgaaattaacaaacagatatatgtcggaacgttttttaccagac
aaagctattgatgctatggacgaagctggttctcgcgtacatattaccaacattgaagtt
cctaaaaaaatacttgatttagaacgtcaattagaagaaattagagacttaaaaaatgcg
gtagtcaaaaaacagaaatatgaagaggctgctaaacttcgcgatgatgaaaaacgcatc
gagaaagatttagcaatcgctcaggaacaatgggaagaagatgctaaaagcaaccgaatt
caggtaactgaagacaatgttgccgatgtggtttctatgatgaccggaattccggtaaat
cgtattgcacaaacagaaagcaataaattagctaaactaccggaacttattgaaagcaag
gttattggtcaaaaagaagctgtgattaaaattgcccgttctatccaaagaaaccgtgcc
ggattgaaagatcctaatcgacctattggttccttcattttcttaggacaaacaggagtt
ggaaaaacacaattagctaaagttttagctaaagaattattcgattctgaagatgctctg
gtacgaattgacatgagcgaatacatggagaaatttgccatttcccgtttaattggtgcg
cctccaggatacgtaggttacgaagaaggtggacaattaactgagaaagtacgcagaaaa
ccgtatgctgttgttcttttagacgaaattgaaaaagcacatccggacgtgttcaacatg
ttattacaagtacttgatgacggttatttaacagatagtttaggtcgcaaaattgatttc
aaaaacactattattatcatgacttctaacgtaggagcaagacaattaaaagattttggt
cagggagtaggttttggaactgctgccaaagtagcacaggctgatgacaattcgaaaagc
attattgaaaacgctttgaagaaaacatttgcacctgaattcttaaacagaattgacgat
gtaattgtgtttaacgctttagaaaaaaccgatattgatttaattatcgaaatcgaattg
aaaaaattatatgccagaattgctgaattaggatacaatttaaatctttctgataaagcc
aaagcatttattgctgaaaaaggtttcgacaaacaatttggtgcaagacctttaaaaaga
gcgattcaaaaatatgttgaagatacacttgccgaagaaattattacttcaaaaattaca
gctggcgatgaaatcttcatggatatagaagatggttctcaagaactaactgtaaaaatt
cacaaaacaggagaggctactaatttataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (32)   
   Pfam (32)   
All databases (39)   

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