KEGG   Flavobacterium commune: BIW12_15480
Entry
BIW12_15480       CDS       T05006                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
fcm  Flavobacterium commune
Pathway
fcm03030  DNA replication
fcm03430  Mismatch repair
fcm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BIW12_15480
   03430 Mismatch repair
    BIW12_15480
   03440 Homologous recombination
    BIW12_15480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fcm03032]
    BIW12_15480
   03400 DNA repair and recombination proteins [BR:fcm03400]
    BIW12_15480
Enzymes [BR:fcm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BIW12_15480
DNA replication proteins [BR:fcm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BIW12_15480
DNA repair and recombination proteins [BR:fcm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BIW12_15480
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 CAF1 DEDDh_C CPSase_sm_chain HTH_11
Other DBs
NCBI-ProteinID: APA01051
UniProt: A0A1D9PEQ0
Position
3707337..3707945
AA seq 202 aa
MLKEPIDESLNIPIESARFVVLDTETTGFDYVTDRILCIGAIVLQNGTINVQDSFEHYID
QEHFDKSSVQIHGIIRRDVLNHKSEIEVLQLLLDYLGDSIIIAHHTKFDITMINTALERN
GLAKLTNKTLDTAILYKKTLIKSNLLQHKDHYTLDDLADKFDISKKDRHTAMGDAYITAI
AFLKIIRKLKEKNEIMLYQLFR
NT seq 609 nt   +upstreamnt  +downstreamnt
atcctaaaagaacctatagatgagagtctgaatattcctattgaatcggcacgatttgta
gttttagacaccgaaactacaggttttgattatgttacagatcgtattctttgtataggt
gctattgttttacaaaatgggactatcaatgtccaggacagttttgagcattatatcgat
caggaacattttgacaaatccagtgttcagatacacggaattataagacgggatgtattg
aatcacaaatctgaaattgaagtattacaattactcttggactatttgggcgactcaatc
ataattgctcatcatactaagtttgacatcactatgattaatactgctctggaaagaaac
ggattagcgaaactaactaacaaaaccttagatacagccattttatacaagaaaacacta
ataaaatctaacttattacagcataaagaccattataccttagacgatctggcagataaa
tttgatatttctaaaaaagaccgacataccgctatgggagacgcttatattacagcaatc
gctttccttaaaattatacgtaaattaaaagaaaaaaatgaaattatgttatatcagttg
tttcgataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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