KEGG   Flavobacterium columnare: FCOL_05625
Entry
FCOL_05625        CDS       T01653                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
fco  Flavobacterium columnare
Pathway
fco03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FCOL_05625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fco03400]
    FCOL_05625
DNA repair and recombination proteins [BR:fco03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FCOL_05625
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      FCOL_05625
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_30 AAA_22 SWI2_SNF2 DUF87
Other DBs
NCBI-ProteinID: AEW85950
UniProt: G8XA92
Position
complement(1303136..1305127)
AA seq 663 aa
MKFQVVSNFSPMGDQPQAIKKLAEGIQNDEKYQTLLGVTGSGKTFTVANVVQEVQRPTLV
LAHNKTLAAQLYSEFKQFFPNNSVQYFVSYYDYYQPEAYIPVTGTYIEKDLSINDELEKL
RLSTTSALLSGRRDVLVVASVSCLYGIGNPVEFQKNVISIERNQEISRTKFLHRLVQSLY
ARTEADFNPGNFRIKGDTVEVFPGYADDPFRIHFFGEEIEEIEAFDVKTSRVIERYEKLN
IYPANMFVTSPDVLQNAIWNIQQDLVKQVDYFKETGKHLEAKRLEERTNFDLEMIRELGY
CSGIENYSRYLDGREAGTRPFCLLDYFPDDFLMVVDESHVTISQVHAMYGGDRSRKENLV
EYGFRLPAALDNRPLKFEEFEALQNQVIYVSATPADYELQKSEGIYVEQIIRPTGLLDPI
IEVRPSTNQIDDLIEEIQRRCEVDERVLVTTLTKRMAEELTKYLTKVSIRCRYIHSDVDT
LERVQIMQDLRKGLFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTVGRA
ARNINGKAIMYADKITDSMQRTIDETNYRREKQINFNTAHNLVPRALNKSIENHLSKSST
NSSHHEHSISKAAEPETEYLTKPEIEKRIREKRKAMEKAAKDLDFMQAAKLRDEIKVLQE
KLN
NT seq 1992 nt   +upstreamnt  +downstreamnt
atgaaatttcaagttgtatctaatttttctcctatgggagaccagcctcaagctattaaa
aaattagccgaaggaatccaaaatgatgaaaagtatcaaactttattaggtgtaacagga
tcaggtaagacttttacagtagccaatgtagtacaagaagtacaacgtcctactttagtc
ctagcacataacaaaacattagctgctcaattatattcagagttcaaacaatttttccct
aataattcagtacaatactttgtatcttactatgattattaccaacccgaagcatatata
cctgtaacggggacttatatagaaaaagatttatcaattaatgacgaattagaaaaactt
cgtttaagcactacctctgccctactttccggtcgaagagatgtattagtggtcgcttct
gtttcatgcctatatggtattggaaatcctgtcgagtttcaaaaaaatgttatttctatt
gaaagaaatcaagaaatttcaagaacaaagtttttacatcgtttggttcaaagtttatat
gctcgtactgaagcagattttaatcccggtaactttagaataaaaggagacactgttgaa
gtctttcctggttatgcagacgatccctttagaatacatttttttggcgaagaaattgag
gaaattgaggcttttgatgtaaaaacgtccagagtaatagagcgttatgaaaaactaaac
atttatccagctaatatgtttgttacctctcctgatgttttacaaaatgctatttggaat
attcaacaagacttggtgaaacaagtagattattttaaagaaacaggcaaacatttagaa
gcaaaacggttagaagaacgaacgaattttgacctcgaaatgatccgtgaattggggtat
tgctcaggaattgaaaattattctcgctatttagatggtcgggaagctggtactcgtcct
ttctgtttattagattattttccagatgattttttaatggttgtagatgaaagtcacgta
actatttctcaagtacatgcaatgtatggtggcgatagaagtagaaaggaaaacttggtt
gaatatggttttagattgcctgctgctttagataaccgtcctcttaagtttgaagaattt
gaagccctacaaaatcaagtcatttatgtatctgcaacacccgctgattatgaattacaa
aaatctgagggtatttatgtagaacaaattattcgtccaacaggattgttagacccgatt
attgaagtacgtccaagtaccaaccaaatagacgatttaatagaagaaatccaacgacgc
tgtgaagtagatgaacgtgttttagtaactactttaaccaagcgtatggcggaagaattg
actaaatatttaaccaaagtttccattcgctgtcgttatatacattctgatgtagataca
ctagagcgggtacaaatcatgcaggatttacgcaagggtttatttgatgtgttaattggt
gttaacttacttcgtgaaggattggatttaccagaagtttctttagtagctatcctagat
gctgataaagaaggttttttacgcagtcatcgttctttaacacaaactgtaggacgtgcc
gctcgtaatattaatggtaaagctattatgtatgctgataaaataacggattctatgcaa
cgtacgattgatgaaacgaattatcgtcgtgaaaaacaaattaattttaataccgcacat
aatttagtaccaagagctttgaataaatctattgaaaatcatttatctaaaagttcaaca
aatagttcccatcatgaacattctatttctaaagctgcagaacctgaaacggaatatcta
actaaacctgaaatagaaaaacgtattcgtgaaaaacgaaaggcaatggaaaaagctgct
aaagatttagattttatgcaagcagcaaaattacgtgacgaaataaaagttttacaagaa
aagttaaactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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