KEGG   Flavobacterium crocinum: HYN56_03035
Entry
HYN56_03035       CDS       T06596                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fcr  Flavobacterium crocinum
Pathway
fcr03410  Base excision repair
fcr03430  Mismatch repair
fcr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fcr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HYN56_03035 (recJ)
   03430 Mismatch repair
    HYN56_03035 (recJ)
   03440 Homologous recombination
    HYN56_03035 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fcr03400]
    HYN56_03035 (recJ)
DNA repair and recombination proteins [BR:fcr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     HYN56_03035 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     HYN56_03035 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      HYN56_03035 (recJ)
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 LsmAD
Other DBs
NCBI-ProteinID: AWK03248
UniProt: A0A2S1YGV4
Position
627454..629157
AA seq 567 aa
MRWTLKPKPAEDKIKRLAEALNVEDFVATLLIQRGIETFEDAKNFFRPSLEHLHDPYLMK
DMDKAVARIELAIENQENILVFGDYDVDGTTAVSLVSSYLKSHYPHIATYIPDRYDEGYG
ISYKGIDYADDNGISLIIALDCGIKSIDHIAYAKAKNIDFIICDHHRPGEFLPDAIAVLD
PKREDCSYPYDELCGCGVGFKLIQALGQNRNETIEDLVPYLDLVATAIAADIVPITGENR
VLAYFGLKVINSEPRPGIKALTHQVKKKVLDITDVVFIISPRINAAGRIKHGNHAVELLT
EFDFEQAQQFASEIEQYNADRKDLDKKITKEAFQQILQNNEEERFSTVVFQEDWHKGVIG
IVASRLIETYYRPTLVFTKSGDKYAASARSVKGFDVYNALDACSEHLEQFGGHMYAAGMT
LKAENYQLFKEAFEKCVQETIQPEMRTPEIEIDAEINFSDITPKLIRILKQFEPFGPQNM
TPVFMTKNVKDTGYAKTLGAEEEHLRLFAKQYNSDGIAAIGFGLGKKLNITQNQNLFQLA
YTIAENEWNGTISTQLMLKDIRTNGRD
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgcgttggaccttaaaaccaaaacctgctgaagataaaatcaaacgtttggcagaagct
ttaaatgttgaagattttgtagcaacacttttgattcagcgcggcattgaaacttttgaa
gatgccaaaaatttctttcgtccatctttagaacatctgcacgatccatatttgatgaaa
gatatggacaaagcagtagcacgaatcgaattggcaatcgaaaatcaggaaaatattttg
gttttcggtgattatgatgtggatggaacaactgctgtttctttggtttcttcttattta
aaatcacattatcctcatattgccacttatattcctgatcgttacgatgaaggttacgga
atatcctacaaaggaattgactacgcagacgacaacggaatttccttaattattgctttg
gactgcggtatcaaatcgattgatcatatcgcttacgcgaaagcgaaaaacatcgatttt
attatctgcgaccaccacagaccaggagaatttctacctgatgcaattgccgttttagat
ccgaaaagagaagactgctcctacccttacgacgaattatgtggttgtggcgttggcttt
aaattgattcaggctttaggtcaaaatcgaaatgaaactattgaagatttagttccgtat
ttggatttagtcgctacagcaattgcagcagatattgttccgataacaggcgaaaatcga
gttttggcttatttcggattgaaagtcatcaacagcgaaccaagaccaggaattaaagct
ttgactcatcaagtaaaaaagaaagttttagatattacggatgttgtttttattatttct
cccagaattaatgctgcgggaagaatcaaacacggaaatcacgccgttgaacttttaacc
gaatttgattttgaacaagcacaacaattcgcttcagaaattgaacaatacaatgctgac
cgaaaagatttagacaaaaaaatcaccaaagaagcttttcagcagattttgcaaaacaat
gaagaagaacgtttttcgacagttgtttttcaggaagactggcacaaaggtgttatcgga
attgtggcttcaagattaatcgaaacctattatcgtccgactttggtttttactaaaagc
ggcgacaaatatgctgcttctgcccgatctgtaaaaggatttgatgtttacaatgcactc
gatgcatgttcagaacatttggaacaatttggaggacatatgtatgccgcaggaatgact
ttaaaagccgaaaattatcagctttttaaagaagcttttgagaaatgcgttcaagaaacc
attcaacctgaaatgcgtactccggaaatcgaaattgatgccgaaataaatttttctgat
ataacaccaaaactgattcggattttaaagcaatttgaaccttttggccctcaaaatatg
acccccgtttttatgactaagaatgtaaaagatactggttatgctaaaactctaggtgca
gaagaagaacatttaagactattcgcaaaacaatataattccgacggaattgccgcaatt
ggctttggactcggaaaaaaactaaacataacacaaaatcaaaatctgtttcaattggct
tacaccattgccgaaaatgaatggaacggaactatttcaacacagcttatgctgaaagac
attagaacaaatggaagagattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system