KEGG   Fragilariopsis cylindrus: FRACYDRAFT_149688
Entry
FRACYDRAFT_149688 CDS       T04784                                 
Name
(GenBank) hypothetical protein
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FRACYDRAFT_149688
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fcy03400]
    FRACYDRAFT_149688
Enzymes [BR:fcy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     FRACYDRAFT_149688
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     FRACYDRAFT_149688
DNA repair and recombination proteins [BR:fcy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     FRACYDRAFT_149688
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco Fpg-like_C
Other DBs
NCBI-ProteinID: OEU13462
JGI: 149688
UniProt: A0A1E7F5L9
Position
Unknown
AA seq 306 aa
MPELPEVESFRRLLLPLVSGEHPLRLERQSLEKSPPSKFVTDDEINEVHGLDLIVSDVLR
KGKLICLVLKGKKGKFNNSNNNTNGNNKKKNKNENKNVAGTKYMFLHMGMTGRISTPDHI
PKLKELKDTDIYPPPYTYIRLVAGPNEASFSDPRKFGSMYLRDKLEDDFDILAPDALNEL
LLDAIIAKLIQQSMGIKGILLDQKRCVCGVGNWVADEVLYQTNMHPDQNFLSEEQALLVL
HRLHMILKQAVQCLSQDQEFPQEWLFHYRWSKRGSAKKTVTDAKGRSIIFVTSGGRTSAV
VPSIQK
NT seq 918 nt   +upstreamnt  +downstreamnt
atgccagagctaccagaagtagaaagctttcgtcggttactactgccgttagtctctgga
gaacatccgttgagattggaacgacagtcactcgaaaagtcaccaccttcaaaattcgtt
actgatgacgagataaacgaagtacatggtttagatcttatcgtttctgatgttttgaga
aaaggtaaacttatttgtttagtcttgaaggggaagaaaggaaaatttaataatagtaat
aataataccaatggaaataataagaagaagaacaagaacgagaacaagaatgttgcagga
actaaatatatgtttcttcacatgggaatgacggggcgtatttcgacaccagatcatatt
ccaaaattaaaagaacttaaagatacggacatatatcctccaccttacacatatataagg
ctggttgcaggtcccaacgaggcatcgttttctgatccaagaaaatttggttctatgtat
ttgagggacaaactcgaagacgattttgatatcttagcaccagatgctctgaacgaatta
ttattagatgctatcatagctaaattaattcaacaatcaatgggaatcaagggaatatta
ttagatcaaaaacgatgtgtatgtggagtcggtaattgggtagcagatgaggttttgtat
caaacaaatatgcatccagatcaaaatttcctatcagaagaacaagcattattggttctt
catcgtttgcacatgattttgaaacaagctgtacagtgtctttcacaagatcaagaattc
cctcaggaatggctttttcattatcgatggagtaaaagggggagtgctaaaaagaccgtg
acggatgcaaagggtcgatctattatcttcgtaacatcaggaggaagaacttctgccgtt
gttccgtctattcaaaag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (56)   

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