KEGG   Fragilariopsis cylindrus: FRACYDRAFT_185561
Entry
FRACYDRAFT_185561 CDS       T04784                                 
Symbol
Top2b_1
Name
(GenBank) type II DNA topoisomerase
  KO
K03164  DNA topoisomerase II [EC:5.6.2.2]
Organism
fcy  Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fcy03032]
    FRACYDRAFT_185561 (Top2b_1)
   03036 Chromosome and associated proteins [BR:fcy03036]
    FRACYDRAFT_185561 (Top2b_1)
Enzymes [BR:fcy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     FRACYDRAFT_185561 (Top2b_1)
DNA replication proteins [BR:fcy03032]
 Eukaryotic type
  DNA Topoisomerases
   FRACYDRAFT_185561 (Top2b_1)
Chromosome and associated proteins [BR:fcy03036]
 Eukaryotic type
  Chromosome condensation proteins
   Other regulators of chromosome condensation
    FRACYDRAFT_185561 (Top2b_1)
  Centrosome formation proteins
   Centriole proteins
    FRACYDRAFT_185561 (Top2b_1)
SSDB
Motif
Pfam: DNA_topoisoIV TOPRIM_C DNA_gyraseB Toprim HATPase_c RRM_Rrp7
Other DBs
NCBI-ProteinID: OEU16511
JGI: 185561
UniProt: A0A1E7FEB3
Position
Unknown
AA seq 1258 aa
MLQRFCGQSFKFRNRSLVSFGFNTYDSTRISTIISPSCSNNDIYNVSAGHFFSSSTATTS
VTERNSTESKLDNINERSVEEQYIRKTPLEHVLLRPGMYVGPTERLPPIDCWVLDPSPKP
LGTKKNISFKMIQKEYGLIPALQKVFDEILVNATDNQLRHPKSCTLLDVSIEQGSKSKEP
IIRIWNNGKGIPIKIHKEENMYLPEMLFGHLLTGSNFDDTEKRLTGGRHGYGAKLSNIFS
KSFTIETVDCRQRLHYKQTWTKNMTEAGEPQITTLDKSDAKEDYTCISFVPDIQRLSGDP
KITTINNHDYALMCRRVVDAAGCAAGKLEVILNGHDVSMESFADYINLYRKKDKLSSEMC
YTKIGSRWNVGIGLSDSNSFVSVSFVNGMFTSRGGTHINAIINQVVKRIQEKATKSDPSL
SNVLTPGLIRRNIFLACNAYIENPTFDSQMKDHLTSNPSSFGSSYTLTEKYLKELVRTEE
NGGPGIVEEVLRVAKGQQQANLFKQVGGKKTKRQLLSIPKLEDAHNAGSNGDSKCTLILT
EGDSAKALAVAGLEIIGRDKFGVFPLRGKFLNVRTCRVDQLSNNAEVKALFAILGLNFDK
EYDTMEERNELRYSHIMLMTDQDEDGSHIKGLVINFFRHFWPKLLKPAVDEPFDQPFLSS
FATPLLKAIRKNSKKYLSFYSVAEYNAWRASLIGTNDDIGKWKVKFYKGLGTSTPAEAKE
YFSAFDKHHVPFIWKSELDGELLDKVFDKSRAADRRDWITSVYDPESTLSYDAEGRITYE
DFVNKEMIHFSNSDNVRSIPSVIDGLKPSQRKVLHACFKRKLKSEIKVAQLSGYCAEHTA
YHHGEASLQSTIIGMAQDFVGSNNINLLVPSGQFGTRLAGGEDAASPRYIFTHLSPITRY
LFPEDDDMLLDYLEDDGQSIEPKFFCPIIPLLLVNGTQGIGTGWSTFIPQHKPLSVVDYI
RAKLDQTLSIPQIEPYSRGFEGVIDRQENGYASYGRMRILDDKTIFIDELPIGIWTNNYK
TFLLKMQSKGTIVDFKEDHTTTKVSFTVKLKSAELHRMQQSGLEKAFKLNSNLPMTNMNA
FDDQSAIQKFVSAESIADTYFPVRMSLYHDRKSMLMSEMNYKTSVLENKARFIQLVSEGQ
IELLGGKMSKDKSFSVLESFGFSTTDELNQLRNNNSIYRKQIHEDSSGNDVNIVEQDTDN
ETSSFDYLFKMPLSSLTSDRIGALKKESSQTTSDLNAIRELQPEEIWLSDLDKLAQYL
NT seq 3777 nt   +upstreamnt  +downstreamnt
atgcttcaacgtttctgtggacaatcgtttaaattcagaaatagatctttggtctctttt
ggattcaatacctatgattcgacgagaatctcaacaatcatctcgccatcatgcagcaat
aatgatatttacaacgtttctgcagggcattttttctcctcttctacagcgacgacaagt
gtcacagaaaggaattcgacagaatcaaaactggataatataaatgaaagatctgtagag
gaacaatacatcagaaaaactccacttgaacatgttcttttgcgtcccggtatgtacgtt
ggcccaactgaacgtcttccacctattgattgttgggttttagatccttccccgaaaccg
ctcggtacaaaaaagaacatctcatttaagatgatacaaaaggaatacggcttaatacca
gcattgcaaaaagttttcgatgagatcctagtcaatgcaacagacaatcaattgcgacac
ccaaaatcttgtacgttactagatgtatccatcgaacaggggagcaagagcaaagaaccg
attattcgcatatggaacaatgggaaagggataccaattaaaatccacaaggaagaaaat
atgtaccttcctgaaatgctctttggtcacttattgactggaagtaacttcgatgacact
gagaaacgacttacgggaggtcgacatggttacggtgccaaactttccaacatcttttcc
aaatcattcacaatagaaacagttgattgtcgacaacgacttcattataaacaaacgtgg
actaagaatatgacagaagcgggagaaccgcaaatcacaacgctagataagtccgatgca
aaagaggactatacctgtattagctttgttcctgatatacaacgactttcaggtgatcca
aaaataacaacaattaataatcatgattatgccttaatgtgtcgacgagtcgtcgatgca
gcagggtgtgctgcggggaaattagaagtcattttaaatggacatgatgtatcaatggag
tcttttgcagactacatcaatctatacagaaaaaaagataaattgtcatcagaaatgtgc
tatacaaagatagggtcccggtggaatgtaggcattggactgtcagatagtaactcattc
gtgtcagtatcatttgtgaatggcatgttcacgtcgagaggaggaacacatatcaatgct
attatcaatcaagtggtcaaacgcattcaagaaaaggccacaaaatctgatccaagtctc
tcaaatgtcctaacaccgggtctaatacgtaggaatatatttctggcatgtaacgcatat
atcgagaatccaacttttgactcacaaatgaaagaccacctgacgtctaatccaagcagt
ttcggaagctcgtatactctcactgaaaaataccttaaagaactagtccgaaccgaagag
aatggaggaccaggtatcgttgaagaagtattacgtgtagccaaaggacaacaacaagca
aatcttttcaaacaggtcggaggaaagaagaccaagcggcagctactttcaatacccaag
ctcgaagatgcacacaatgcaggttcgaatggtgattcgaaatgcactctaatactgaca
gaaggagattctgcaaaagcattggcggttgctggattagaaattattggaagagacaaa
tttggtgtttttcctctccgtggaaagtttctcaatgttcgtacctgtcgagtagatcaa
ctatcaaataatgcggaagtgaaggccttatttgcaattcttggactcaattttgataag
gagtacgatactatggaagaacgcaacgagcttcgatatagccacattatgctcatgaca
gatcaagacgaggatggatcacatatcaagggactggtaatcaatttctttcgtcacttt
tggccgaaattgttgaaaccagcagtcgacgaaccttttgaccaaccgtttctctcgtct
tttgcgacaccccttctgaaggcaattaggaaaaatagtaaaaaatacctatctttttac
tccgtggcagaatacaatgcatggcgagcctcccttattggtaccaatgatgatatcggg
aaatggaaagttaagttctataaaggactcggtactagtacgccagcagaagccaaagag
tacttttctgcattcgataaacatcatgtaccgttcatttggaagtcagaattagatggt
gagcttctagataaagttttcgacaagtctagggcagctgaccgtcgggattggatcact
agtgtatacgaccctgaatcaaccttatcatatgatgccgaaggtcgtatcacttacgaa
gactttgtgaacaaagaaatgattcacttttccaacagcgataacgtcagaagcatacca
agcgtaatcgacggacttaaaccatcccaaagaaaagtactgcatgcctgtttcaagaga
aagttaaaatctgaaatcaaggttgctcagcttagtggctattgcgctgaacacactgct
tatcatcatggtgaagcttccttacagtcaactatcatcggaatggctcaagactttgtt
ggatcaaacaatatcaatctgttggtcccgtcaggtcagtttggtacgcgtctagcgggg
ggagaggacgcagcttctccacgttacatttttacgcacttatctcctattaccagatat
ctcttcccagaggatgatgatatgctccttgattacctcgaggacgatggtcaatcgatc
gagccaaaattcttttgtccaatcattcctttactgttggtcaatggtactcaaggcatc
ggaactggttggtccacattcattccacagcacaaaccgttgagtgttgtagactatatt
agagcgaagcttgaccaaacacttagtattcctcagattgagccatattcgcggggattt
gagggagttattgatcgccaagaaaatggttacgcaagctacggaaggatgcgtattctc
gacgacaaaacgatatttatcgacgagctaccaattggtatttggactaataactataag
acttttttattgaagatgcaatcaaagggaactattgttgactttaaagaagaccataca
actacaaaggtttcgtttacagtgaaactgaaatctgccgaacttcacagaatgcaacaa
tcggggttggaaaaagcttttaagctgaactcgaatcttccaatgacaaatatgaatgct
tttgatgaccaaagtgcgattcagaaatttgtttccgcagaatcaattgctgatacttac
tttccggtaagaatgtctctttaccacgaccgaaagtcaatgttgatgtcagaaatgaat
tataaaacttccgtcttggaaaacaaggcccgtttcatccaactagtttcggaggggcaa
atcgaactacttggtggtaaaatgtcaaaagataaatcattttctgtgcttgaatcgttt
ggattcagtacaacggacgaactgaatcaacttcgcaacaataatagcatttaccgcaaa
caaattcatgaggattcgagtggtaacgatgttaatattgtggaacaggacacagacaac
gagacgtcttcgttcgattatctcttcaagatgccattgtcatctctaaccagtgacagg
attggagcattaaaaaaagagtcatcccaaacaacgtctgacctaaatgcgatacgggag
ttgcaaccagaagaaatatggttatctgatttggataaactagcccaatatttataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (91)   
   KEGG ORTHOLOGY (1)   
   RefGene (87)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (104)   

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