KEGG   Fragilariopsis cylindrus: FRACYDRAFT_194432
Entry
FRACYDRAFT_194432 CDS       T04784                                 
Name
(GenBank) RNA polymerase Rpb6
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03020  RNA polymerase
fcy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FRACYDRAFT_194432
  09124 Replication and repair
   03420 Nucleotide excision repair
    FRACYDRAFT_194432
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fcy03021]
    FRACYDRAFT_194432
   03400 DNA repair and recombination proteins [BR:fcy03400]
    FRACYDRAFT_194432
Transcription machinery [BR:fcy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     FRACYDRAFT_194432
  RNA polymerase III system
   RNA polymerase III
     FRACYDRAFT_194432
  RNA polymerase I system
   RNA polymerase I
     FRACYDRAFT_194432
DNA repair and recombination proteins [BR:fcy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      FRACYDRAFT_194432
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: OEU10117
JGI: 194432
UniProt: A0A1E7EW88
Position
Unknown
AA seq 90 aa
MLVSTGTAAAERVTTRYLTKYERARVLGTRALQISMNAPVMVDLDGETDPLRIAEKELRE
RKIPIIVRRYLPDGSHEDWGIDELIVGVDS
NT seq 273 nt   +upstreamnt  +downstreamnt
atgttagtatcaacaggaacagctgctgctgaacgggtcactacccgttatttaactaaa
tatgaaagagcaagagtactcggtacacgtgcattacaaattagtatgaatgcacccgtt
atggtcgatttggatggagaaacagatccattacggatcgcagaaaaggaattacgagaa
agaaaaattccaatcattgttcgaagataccttcccgatggtagccatgaagattggggc
atcgatgagttaattgtaggcgtggattcataa

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