KEGG   Fragilariopsis cylindrus: FRACYDRAFT_210287
Entry
FRACYDRAFT_210287 CDS       T04784                                 
Name
(GenBank) Sm-like ribonucleo protein
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FRACYDRAFT_210287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fcy03019]
    FRACYDRAFT_210287
   03041 Spliceosome [BR:fcy03041]
    FRACYDRAFT_210287
   03032 DNA replication proteins [BR:fcy03032]
    FRACYDRAFT_210287
Messenger RNA biogenesis [BR:fcy03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     FRACYDRAFT_210287
Spliceosome [BR:fcy03041]
 Complex A
  U1 snRNP components
   Sm proteins
    FRACYDRAFT_210287
  U2 snRNP components
    FRACYDRAFT_210287
 Complex B
  U1 snRNP components
    FRACYDRAFT_210287
  U4/U6.U5 tri-snRNP components
    FRACYDRAFT_210287
 Complex C
  U2 snRNP components
    FRACYDRAFT_210287
DNA replication proteins [BR:fcy03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     FRACYDRAFT_210287
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-ProteinID: OEU13140
JGI: 210287
UniProt: A0A1E7F4R2
Position
Unknown
AA seq 113 aa
MSNLGVPIKLLFEAEGMKVTAEMKNGEIYRGLLLSAEDTMNMTLSDVLRTAKNGQISKLP
SVYLRGSSIRFIALPDLLKNAPVFQKVTSMKRKMEQESKERQSSKGGGKRKRD
NT seq 342 nt   +upstreamnt  +downstreamnt
atgagtaacttaggagtaccaattaaacttctgtttgaagcagaaggaatgaaagtcact
gcagagatgaagaacggtgaaatttatagaggtttgttattaagtgcagaagatacaatg
aatatgacattatcagatgtattgagaacagcaaagaatggacaaatatctaaattaccg
agtgtatatttacgaggaagtagtatccgatttattgcactacctgatttattaaagaat
gcacctgtatttcaaaaagttacatcaatgaaacgtaaaatggaacaagaatcgaaagaa
cgacaatcatcaaagggagggggcaaaagaaaacgggattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (196)   
   KEGG ORTHOLOGY (1)   
   RefGene (192)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (205)   

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