KEGG   Fragilariopsis cylindrus: FRACYDRAFT_252263
Entry
FRACYDRAFT_252263 CDS       T04784                                 
Symbol
mSHMT_1
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy00260  Glycine, serine and threonine metabolism
fcy00460  Cyanoamino acid metabolism
fcy00630  Glyoxylate and dicarboxylate metabolism
fcy00670  One carbon pool by folate
fcy01100  Metabolic pathways
fcy01110  Biosynthesis of secondary metabolites
fcy01200  Carbon metabolism
fcy01230  Biosynthesis of amino acids
fcy01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    FRACYDRAFT_252263 (mSHMT_1)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FRACYDRAFT_252263 (mSHMT_1)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    FRACYDRAFT_252263 (mSHMT_1)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    FRACYDRAFT_252263 (mSHMT_1)
Enzymes [BR:fcy01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     FRACYDRAFT_252263 (mSHMT_1)
SSDB
Motif
Pfam: SHMT Beta_elim_lyase DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: OEU07082
JGI: 252263
UniProt: A0A1E7EMB3
Position
Unknown
AA seq 513 aa
MFALKSCGLRPTATAVTAARITKSAMRSLSSSSGAYLNRDLSDQDPELLNLIEQEKARQR
NSLVLIASENFTSKAVLQALGSVLSNKYSEGYPGARYYGGNENIDQVELLCQKRALEAFQ
LDPEEWGVNVQSLSGSPANFQVYTALLQTHERILSLDLPHGGHLSHGFQTPTKKISAVSR
YFESMPYQLDPSTGTIDYDQMEKSAELFRPKLIVAGASAYARLIDYERIRNIADSVGAYV
LADMAHISGLVSAKVIPSCFPYADVVTTTTHKSLRGPRGAMIFFRKGQKGVDKKGNPIMY
DLEEKINFAVFPGLQGGPHNHTIGALATCLKQANTPEFVEYQKQVLKNCSRLSDELIKRG
YHLVSGGTDNHLVLVDLKTSRKIDGARVERVLEMACIATNKNTIPGDKSALNPGGIRMGT
PALTSRGLTEDDFTKVAEYFDRAVAIAVDLKENTEEGKKLKGFRKMCTVGPSVHPDLVQL
RKEVSEFACEFPTVGFDESEMAYEGEYNVDFVA
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgttcgcactcaaatcttgtggattacgtccgacagcaacagcggtcaccgccgctcga
attacgaagagtgccatgagatcactttcctcatcttctggagcatatttaaatcgtgat
cttagtgatcaagatcctgaacttcttaatttaattgaacaagaaaaggcacgacaacgc
aattcattagtgttaatcgcatcggaaaactttaccagtaaggctgtattacaggcatta
gggtccgtcctttctaacaagtacagtgagggatatcctggtgcacgttattacggagga
aatgaaaatattgatcaagtagaattgttatgtcaaaagcgtgctcttgaggcatttcag
ttagacccagaggaatggggtgttaacgtccaatccttatcaggatcacctgctaacttc
caggtatacacagctcttttgcagacacatgaacgtatcttatctttagatttacctcat
ggaggtcatctttcgcatggatttcaaactcccacgaaaaagatttctgctgtctctcga
tactttgaatctatgccgtaccaactcgatccgtcgacaggaacaatcgattatgatcag
atggaaaaaagtgctgaactatttcgtcctaaattgattgtagctggtgcatctgcgtat
gcacgtttgattgattatgaacgtatccggaacattgccgatagtgtaggtgcatatgta
ttagcagatatggcacatatttctggtcttgtttctgctaaggttattccgtcctgtttc
ccatatgccgatgttgtaacgaccaccacacataaatctcttcgtggtcctcgtggtgca
atgatcttcttccggaaaggacaaaagggtgttgacaagaaggggaatcctatcatgtat
gatttagaagaaaagattaactttgcagtatttcctggtctacagggtggtcctcacaac
catacgatcggtgctcttgcaacatgcttaaaacaggcgaatacacctgaatttgtggaa
tatcaaaagcaggtccttaaaaattgttctcgtctctctgatgaattaatcaagagaggg
tatcacttggtcagtggtggaactgataaccatcttgttttggtcgatttgaagacgtcc
cgaaagatcgatggagcacgcgtcgaacgggtattggagatggcatgtatcgctactaac
aaaaataccatcccgggtgataaatctgctttgaatcctggtgggatccgaatgggaaca
ccagcattgacctcacgaggacttacagaagatgactttacgaaggttgccgaatacttt
gatcgggctgtagcaattgcagtagatttaaaggagaatacagaagaaggtaaaaaatta
aagggatttagaaaaatgtgtaccgttggaccatctgtccatcccgatttggtgcaacta
cgaaaggaggtatcggaatttgcctgtgaatttccaacagttggattcgatgaaagtgaa
atggcatatgaaggagaatacaacgttgactttgttgcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (14)   
   KEGG PATHWAY (9)   
   KEGG MODULE (5)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (314)   
   KEGG ORTHOLOGY (1)   
   RefGene (310)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (345)   

Download RDF
DBGET integrated database retrieval system