KEGG   Fusobacterium gonidiaformans: C4N16_07510
Entry
C4N16_07510       CDS       T05460                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fgo  Fusobacterium gonidiaformans
Pathway
fgo03410  Base excision repair
fgo03430  Mismatch repair
fgo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fgo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    C4N16_07510 (recJ)
   03430 Mismatch repair
    C4N16_07510 (recJ)
   03440 Homologous recombination
    C4N16_07510 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fgo03400]
    C4N16_07510 (recJ)
DNA repair and recombination proteins [BR:fgo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     C4N16_07510 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     C4N16_07510 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      C4N16_07510 (recJ)
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: AVQ17384
Position
complement(1507164..1508840)
AA seq 558 aa
MGGYNSEKLLSTLLKNRGIQDFSKLHEFINPSVSSFRDPFLFENMETIVSMLEKAKKEGS
RICIYGDYDVDGITGTAFLVKVFRQIGMDTLYYIPSRDEEGYGLTKKNIDFLLEKGVKLV
ITVDTGYNSLEDIAYAKSKSMEVIISDHHKTVREEGDEDILFLNPKLSQSYEFKFLSGAG
VALKIAQALYQRLHLDLNELYQYLDIIMIGTIADVVPMVDENRIIIKNGLRILQKTKVKG
LSYLLKYLKFGDKHINTTDVSYYISPLINSLGRVGTSRIAADFFIKEDDFEIYNIIEEMK
KLNKKRRELEKNIYDDAIHSIEKNGKKGLKCIFLANRRWHPGVIGVVSSRLSLKFQVPVV
LIALEGKLGKASCRSVRNISVYNILEEVKEDLVRYGGHDLAAGFTIEEEKVEKVRQYFME
YLSRDTQAVERKKKYTIDMELPLEAIGENLLKDIEKISPFGSENPHPLFLEKNLNFREIR
KFGVDQRHFNGTLVKAGREYPAVGFDLGHRIQLDTYLAQTFDIVYYPEKVNLHGEKMIQI
RIKDIIIKDEFYDIFIKS
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgggagggtataattcagagaaactactaagcacccttttaaaaaatagagggattcaa
gatttttcaaagcttcatgaatttataaaccctagtgtttcttcttttcgagatcccttt
ctgtttgaaaatatggaaactattgtttctatgttggagaaggcaaagaaagagggaagt
agaatttgtatttatggggactatgatgtcgatggaattacaggaaccgcttttttggta
aaggtatttcggcaaattggaatggataccttgtattatattccgagtcgagatgaagaa
ggctatggattgactaaaaaaaatatagacttcttattggaaaaaggagtaaaacttgtt
attactgtggacacaggatacaattccttggaagatattgcttatgcaaaatcaaaaagc
atggaagtgattattagtgatcatcataagacagttcgagaagaaggagatgaagatatt
ttatttctaaacccaaaactaagtcaaagttatgaatttaaatttttgtccggagcagga
gttgcactaaaaattgcacaagctttgtatcaaagattgcatttagacttaaatgaacta
tatcaatatttggatattatcatgataggaaccattgctgatgtggttcctatggtagat
gaaaatcgaattattattaaaaatggacttagaattttacagaaaacaaaggtaaaaggt
ttatcctatttattaaaatatttgaaatttggagataagcatatcaatacgacagatgta
agttattacatttctcctttgattaactctttaggaagagttggaacttctagaattgca
gcagatttttttatcaaagaagatgattttgagatctataatatcattgaagaaatgaaa
aagttgaataaaaagcgaagagaattagaaaaaaatatttacgatgatgcgattcattcc
attgaaaaaaatgggaaaaaaggtttgaaatgtatctttttagcaaataggcgttggcat
cccggtgtaattggagttgtgtcttctagactaagtttgaaatttcaagttcccgtagta
ttgattgctttagagggaaaattggggaaagcttcttgtagaagtgtaagaaatattagt
gtttataacattttagaagaagtaaaagaggatttagttcgttatggagggcatgatcta
gcagcaggatttacgattgaagaagaaaaagtggaaaaggtaagacaatactttatggag
tatctttcacgagatacacaagctgtagaaagaaaaaagaagtatacgattgatatggaa
ttacctttggaagctatcggagagaatttgttgaaggatattgaaaaaattagtcctttt
ggatcagaaaatccacatcctctatttttagagaaaaatttaaattttcgagagattcga
aagtttggagtggatcaaagacattttaatggaaccttagtcaaagccggaagagaatat
ccagccgttggatttgatttgggacatcgtattcaattagatacttatttggcacaaaca
tttgacatagtatattatcctgaaaaggtcaatctccatggagagaaaatgattcaaatt
aggattaaagatataattattaaagatgaattttatgatatattcatcaaatcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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