KEGG   Fusarium graminearum: FGSG_02043
Entry
FGSG_02043        CDS       T01038                                 
Name
(RefSeq) hypothetical protein
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
fgr  Fusarium graminearum
Pathway
fgr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fgr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FGSG_02043
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fgr03019]
    FGSG_02043
Enzymes [BR:fgr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     FGSG_02043
Messenger RNA biogenesis [BR:fgr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     FGSG_02043
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     FGSG_02043
SSDB
Motif
Pfam: Exo_endo_phos LRR_8 LRR_4
Other DBs
NCBI-GeneID: 23549442
NCBI-ProteinID: XP_011317916
UniProt: I1REF5
Position
1:complement(6733633..6735781)
AA seq 698 aa
MYTQHSGQGQHGRMNGAGRGIPNMIYNYQHPSHQHPSQTQHHQGLQHDHGMPNVNGLAHH
SSFTPGGLSNSSPFAPNALQNGHSAGNRGQAPPNEMWQEQLRTHKESERAHAAMTDQQQP
HYYARLKASENRGIGGPPPSSLRAQPDDENDGVDRRRPLTVEKETRRQDWHNMDMSGQGL
RNLAPELFKYRFLNELFIASNKLKILPNAIGELRALRHLDASFNQIEEIPPEIGMCTYLK
NLHLFNNNIRILPNELGSLHLLEMLGIEGNPLDPDIKHEIMEKGTKSLITFLKENAPCPP
PPSPRKLVCIQEDVSPSLERIKVFSWNILCDKYATPQTYGYTPTNALNWDYRRSCILEEL
EIRDADFLALQEVSTDAFKEDLSPDLAQLDYKGVHWPKSRAKTMSEKDAQSVDGCAVFYK
QSKFILLDKQLIEFATIAINRPDMKNQHDVFNRVMPKDNIAVICFFESRLTGARIILVNA
HLTWDSALADVKVIQTGILMEHVTKLAEKYARWPAVKDKKMIVLPVGEDEVPVPQAEPGP
SQEYRTNTEIPLLVCGDFNSTEDSSVYELMSMGRVPPDHLDLSSFQYGSFTRDGIEHPFS
LRDAYAHIKHTADDMPFTNYTPGFADVIDYIWYSTNTLEVVDLLGPPDPEYLKRVPAFPN
WHFPADHIQIMSEFVIKGRKEKKHLPEREPDFGPGSRS
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgtacactcaacactccgggcaaggtcaacatggtcggatgaacggtgccggccgaggc
ataccgaacatgatatacaactaccaacatccttcacaccagcacccctctcagacacaa
caccaccagggacttcaacacgaccatggcatgccaaacgttaacggtttggctcaccac
tcatcattcactcccggcggtctttcgaactcgagtccctttgctccgaatgcgctccaa
aatggccactcagctggaaaccgaggacaagcgcctccaaacgagatgtggcaggagcaa
ttgaggacgcacaaagagtccgaacgagcgcatgctgccatgaccgatcaacaacaaccg
cactactatgctaggctcaaggcgtcggaaaacagaggaattggcggcccaccaccgagt
agcttgcgtgctcagccggacgacgagaacgatggtgttgataggagacgacccctaact
gtggagaaggaaacgagacggcaagactggcacaatatggatatgagtgggcaaggcttg
cgaaacctggcaccggaattgttcaagtatcgcttcttgaacgagctcttcatcgcctcc
aacaagctcaaaatactacccaacgcaattggagaactgcgagcactacgccacctcgac
gcctcctttaaccagatcgaagaaataccccccgagatcggaatgtgcacctacctcaag
aacttgcaccttttcaataacaacattcgaattttgcccaacgaactgggatcgcttcac
cttctcgagatgcttggaatcgaaggtaatcctctggatccagatatcaaacatgagatt
atggaaaaggggacaaagagtctgattactttcctcaaagaaaacgctccttgcccccct
cctccctcgccccggaaactcgtgtgcattcaagaggatgtatcgcccagcttggaaagg
atcaaggtattttcatggaacattctctgcgacaaatatgcaacaccccagacctacggg
tatacaccaacaaacgctctcaattgggactatcgtagaagctgcatcctggaagaactc
gaaattagggacgcagatttcctcgccctccaagaagtctctacagatgcgtttaaagaa
gaccttagccccgacctggctcagttggattacaagggtgttcactggcccaaatcgcga
gccaaaaccatgtctgaaaaggatgcccaatctgtggacggttgcgctgtcttttacaag
cagagcaaattcattcttctcgacaagcagttgatcgagttcgccactattgccatcaac
cgacccgacatgaagaaccaacacgatgtcttcaatcgcgtcatgcccaaggacaacatt
gccgttatttgtttctttgagtcccgcctcactggagctcgaattatcctggtcaacgcc
catcttacatgggattctgctctggctgatgtcaaggttatccagaccggtattctgatg
gagcatgttactaaacttgcggagaagtatgctaggtggcccgcagttaaggacaagaag
atgattgtactaccggtgggcgaagatgaggttcctgtgcctcaggctgagccaggtccc
agccaggaataccgcacaaatacagagatccctctacttgtctgcggtgatttcaactca
acagaagactcgtccgtgtacgagctgatgtctatgggacgtgtgcctccggatcatctc
gacttgagcagcttccagtacggtagtttcacacgcgacggtattgaacaccctttcagc
ctgagggatgcctacgcccacatcaaacacaccgccgacgacatgccatttaccaactac
acacctggattcgccgacgtgattgattacatctggtactcgaccaacactctggaggta
gtagacctactgggaccccctgatcctgaatatctcaaacgagttcccgcttttcccaac
tggcatttccccgccgaccacatccagatcatgtctgaatttgtgatcaaggggcgcaaa
gaaaaaaagcaccttcccgaacgcgagcccgactttggtcctggatcacgcagctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (39)   

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