KEGG   Allofrancisella guangzhouensis: SD28_02435
Entry
SD28_02435        CDS       T03527                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
fgu  Allofrancisella guangzhouensis
Pathway
fgu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:fgu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SD28_02435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fgu03021]
    SD28_02435
   03400 DNA repair and recombination proteins [BR:fgu03400]
    SD28_02435
Enzymes [BR:fgu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SD28_02435
Transcription machinery [BR:fgu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SD28_02435
DNA repair and recombination proteins [BR:fgu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SD28_02435
SSDB
Motif
Pfam: RNA_pol_A_CTD RNA_pol_A_bac RNA_pol_L DUF4094 POLH-Rev1_HhH RAD51D_N
Other DBs
NCBI-ProteinID: AJC48588
UniProt: L8BSU7
Position
518156..519127
AA seq 323 aa
MSNNNLKQEFTPSVQLIEELGAFGYKVQLSPVEKGMAHILGNSIRRVLLSSLPGASVVKV
NIKDVLHEYSTLDDVKEDIVEVVSNLKKVAVKLDENVDNIELELSVSKSGVVTAGDFKST
SGVEIINKDQVIATLTNKREFNLVASVVWGRNVGILSAMPVELEKVGDIAVDADFNPVKK
VAFEVIENSDSEILEIFLKTNGTIDPLKAVTKALEYFCEQMSVFVSLKVPHQGKTGDVLI
DSNIDPILLKPIDDLELTVRSSNCLRAENIKYLGDLVQYSESQLMKIPNLGKKSLNEIKQ
ILIDNNLSLGVVIDNFRELVEGK
NT seq 972 nt   +upstreamnt  +downstreamnt
gtgagtaataataatttgaaacaggaatttacacctagtgtacaacttatagaagaattg
ggtgcttttggatataaggtgcagctctctcctgttgaaaaaggtatggctcatattctt
ggtaactcaattagacgggttcttctttcgtctttgcctggggcgtctgtagttaaagta
aacattaaagatgttttacatgaatattctacattagatgacgttaaggaagacattgtt
gaagtagtttcaaatttgaaaaaagtagcagtaaaacttgatgaaaatgttgataatatt
gaattagagctatcagttagtaaaagtggcgttgttacggcaggcgactttaaatctact
agtggagttgaaattataaataaagatcaagtgattgcgactttaacaaataaaagagaa
tttaacttagttgctagcgtagtttggggaagaaacgttggtatcctttcagctatgcct
gttgaattagaaaaagtaggtgatatagctgtagatgctgattttaatccagttaaaaaa
gtagcttttgaggttattgagaacagtgatagtgaaatattggaaatatttctaaaaaca
aacggtactatagatccattaaaagctgttactaaggctttggagtatttttgtgagcag
atgtcagtatttgtttctttaaaggtgccacaccaaggtaaaactggtgatgttttaata
gactctaatattgacccaatacttttgaagccaatagatgatttagagcttacagtcaga
tcatctaattgtctaagggctgaaaatattaaatatttaggtgacttagtccaatattct
gagtcacaactaatgaaaatacctaacctaggtaaaaaatctcttaatgaaattaagcag
atacttatagataataacttatctcttggagttgtgattgacaatttcagggagttggtt
gagggtaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (34)   

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