KEGG   Francisella halioticida: CDV26_04525
Entry
CDV26_04525       CDS       T04972                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
fha  Francisella halioticida
Pathway
fha03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CDV26_04525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fha03400]
    CDV26_04525
DNA repair and recombination proteins [BR:fha03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CDV26_04525
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH_5 HHH_2
Other DBs
NCBI-ProteinID: ASG67752
Position
828334..830172
AA seq 612 aa
MISDNSKNFDLKSFLANLTTHSGVYRMIDKYGEIIYVGKAKNLRNRVNSYFSKGAKDSKT
LMMTAQVIKIEITITPSDYEAYLLESNLIKQHRPKYNIFFKDDKSYPYLVISRDKFPRVF
FYRGKSAYKKGQCFGPYVSISSVKNTLNIIQKIFPIRQCENSYYKSRIRPCLQYQIKRCL
APCVGLVSQEQYNEQLAILKKFLVGKFSSVLEDVSDKMHQASEKMEYENAQIYRDQLVVL
RKLQQQQIVDIQVDKTFDVVGIYMQDNYASIALLQIQNGDVVADRHWNIDAKNQDKTSIM
HTFLSHFYLSDEIRNIWPKNIILSKVDFSEIQDLMTSISQKIGQSMNWILAPAADNLKWL
KLAEVNARQKLNIYTSSKSQYQKRLDSLKEFLEFDQDIKRIECFDISHFQGEATIASCVV
YTDEGEDRKSHRRYNIKDVKAGDDYAAIHQVVSRRVSSGLEANNLPDVMIIDGGKGQIHQ
AESVFREFGIQDKIQLVSLGKGVERISGKEKIYKGFDDIEYTLDEHDPGFLLLRQARDSA
HDHAIKGQRKKVSSNRQSSVIEEIEGVGPKRRKALLMYFGGWQELSKASVDEIAKVKRVS
KKLAQEIWECFH
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgatttctgataattctaaaaattttgatttaaaaagttttttagcgaatctaaccacg
cattcaggtgtttatcgtatgattgataaatatggtgagataatatacgtaggtaaagca
aaaaaccttagaaatcgtgttaacagctacttctcaaaaggtgctaaagatagtaaaacc
cttatgatgactgcccaagtaatcaagattgagataactattacgccaagtgattatgag
gcttatttgttagagagtaatttaattaagcagcacagacctaaatataatatctttttt
aaagatgataaaagttatccatatttagtgatttctcgagataagtttcctagagttttt
ttttatcgtggtaaatcagcatataagaaaggccaatgttttggtccatatgtatctata
tcttcagtgaaaaatacgctaaatattattcagaaaatatttcctattcgtcagtgtgaa
aattcgtattataaatctagaattaggccatgcttacagtaccagattaagcgttgttta
gctccttgtgtaggactggtttctcaagagcaatataatgaacaattagcaatattaaag
aaatttctagtaggtaagtttagtagtgttttagaagatgtatctgataaaatgcatcaa
gcttcagaaaagatggaatatgaaaacgctcagatttatcgtgatcaattagtagtacta
cgtaaattacagcaacaacaaatagttgatatacaagttgataaaacttttgatgtagtt
ggtatttatatgcaagataattacgcaagtattgctttattacaaattcaaaatggagat
gttgttgcagataggcattggaatatagatgcaaaaaatcaagataaaacatcaattatg
catacatttttatcacatttttatttaagtgatgaaattcgtaatatttggcctaaaaat
ataattttatcaaaagttgattttagtgaaattcaagatttgatgacaagtatttcacaa
aagataggccaatcaatgaattggatattagcaccagctgcagataatcttaaatggttg
aaactagcggaagtaaatgctcgacaaaaattaaatatatatacaagttccaaatctcaa
tatcaaaagcgtttagattcgctaaaagagtttcttgagtttgatcaagatattaaacgt
atagagtgtttcgatatttcacattttcaaggtgaggcaactattgcctcatgtgttgtc
tatacagatgagggagaagatcgtaaatctcatcgtagatataatatcaaggatgtaaaa
gcaggagatgattatgcagctattcatcaggttgtatcacgtcgagtaagctctggatta
gaagctaataatcttccagatgttatgataatagatggaggcaagggtcaaatccatcag
gctgagtcagtatttagagagtttggtattcaagataaaattcaacttgttagtttaggt
aagggagttgaaagaattagcggtaaagagaagatctataaaggttttgatgatattgaa
tatactctagatgaacatgatcctggatttttacttttgcgccaagctagagattctgca
catgatcatgctattaaaggtcagcgcaaaaaggtaagctcaaatagacaatcatcagtt
atcgaagagattgaaggtgtcggacctaagcgtcgtaaagcattactaatgtattttggc
ggttggcaagagttaagtaaggcatcagtagatgagattgctaaagtaaaaagagttagt
aaaaaactagcacaagaaatttgggagtgctttcattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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