KEGG   Fibrella sp. ES10-3-2-2: A6C57_03915
Entry
A6C57_03915       CDS       T04805                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
fib  Fibrella sp. ES10-3-2-2
Pathway
fib03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fib00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A6C57_03915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fib03019]
    A6C57_03915
Enzymes [BR:fib01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     A6C57_03915
Messenger RNA biogenesis [BR:fib03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     A6C57_03915
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 PhoH UTP25 Flavi_DEAD UvrD-helicase DUF3040 SRA
Other DBs
NCBI-ProteinID: ARK09546
UniProt: A0A1W6E2C7
Position
complement(904573..906018)
AA seq 481 aa
MNSTSPEPTPEKTPSFDDFALNRQLLNAVAEAGYTEPTPIQQKAIPAILANHDVLGIAQT
GTGKTAAYLLPVLMRIKYAQGVNPRVLILAPTRELAMQIDQAITELAKHTDIRHVALYGG
LGPKKQIEQLKAGVDIIVATPGRFNDLYRVGEVVTKDLKTMILDEADKMMDMGFMPQIRA
ILEVIPRKRQNLLFSATFPDRVERLSSEFLEAPIRLEVTPETMTAKMVDQVIYEVPNFRT
KINLLNHLITQDTFQRVIVFARTKTNVENIYKFLGRKVLEKGEVRVIHANKGQNTRINSM
EAFKEGNVRVLVATDVAARGIDVAEVSHVINFDVPIIYEDYVHRIGRTGRANHTGEAITF
VTMAEMYHVEKIEKIIKMKVPRRPIPEAVFQVETPFEEQQDMLREIDEQRKKEDPTFKGA
FHEKKEHPGRDRKVRASKSSTPSVGRPASALKKSTARPGGRPAGRSGSAPKAPKKPRAGR
R
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgaattcaacatcacctgagccaacgccagagaaaacgccgtcgtttgatgactttgcg
ctcaaccgacagttactcaacgccgtagccgaagcgggctataccgaaccgacacccatt
cagcagaaagccataccagccatcctggcaaaccatgatgtgttgggcattgcgcagacc
ggtacgggcaaaaccgctgcttacctgcttcccgtgctgatgcggattaagtacgcgcag
ggcgtaaaccccagggtgcttattctggctcctacccgcgaactggccatgcagatcgat
caggccattactgaacttgccaagcataccgatatacgccacgtagcgttgtatggcggt
ttaggtcccaaaaagcagattgagcagttgaaagctggcgttgacattattgtagctacc
ccgggtcgcttcaacgatttgtaccgggtaggggaggtggtaacgaaggatctgaaaacg
atgatcctcgatgaagccgacaagatgatggatatgggctttatgccgcagatccgagcc
attctggaggttattccccgcaaacggcagaatttgcttttctccgcaacgtttcctgat
cgcgtagaacgcctgtcatctgaatttctggaagcaccgattcgcctggaggtaacgcca
gaaacgatgacggctaaaatggttgatcaggttatctacgaggtgcccaacttccggaca
aagatcaacctactgaatcacctgattacgcaggatacatttcagcgcgttattgtgttc
gcccgtaccaaaaccaacgttgagaacatttataaatttctcggccgcaaagtgctcgaa
aaaggagaagtgcgggtaatccacgccaacaaagggcagaatacccgaataaactcaatg
gaggcttttaaggaaggcaacgtgcgggtattggtggcaaccgatgtggcggctcggggt
atcgatgtagcggaagtgtcgcacgtgatcaattttgacgtacctatcatttacgaagat
tacgtacaccgaattggccggacggggcgggccaaccacacaggcgaagcgattacgttt
gtgaccatggctgagatgtaccacgtggagaagatcgaaaagatcatcaagatgaaggtt
ccccgccgccccatccctgaagctgtctttcaggtggaaaccccgttcgaggagcagcag
gacatgttgcgtgagattgacgaacagcgcaagaaagaagaccctacgtttaaaggggct
ttccacgagaaaaaagaacatcctggccgtgacaggaaggtgagggcatcgaaaagcagc
acgccaagtgtaggccgtcctgccagcgcattaaaaaaatcgacagcgcggccgggcggt
agacccgcaggtcgctcagggtcagcgccaaaggccccaaaaaaaccacgggccggacgt
cggtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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