KEGG T01781: KQS

Flavobacterium indicum: KQS_09225

Entry

KQS_09225         CDS       T01781

Symbol

gyrB

Name

(GenBank) DNA gyrase B subunit

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

fin Flavobacterium indicum

Brite

KEGG Orthology (KO) [BR:fin00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fin03032]
    KQS_09225 (gyrB)
   03400 DNA repair and recombination proteins [BR:fin03400]
    KQS_09225 (gyrB)
Enzymes [BR:fin01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     KQS_09225 (gyrB)
DNA replication proteins [BR:fin03032]
Prokaryotic type
  DNA Topoisomerases
   KQS_09225 (gyrB)
DNA repair and recombination proteins [BR:fin03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      KQS_09225 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3

Other DBs

NCBI-ProteinID:

CCG53779

UniProt:

H8XUK1

Position

complement(1963337..1965277)

AA seq 646 aa
MSDEVKKNNYSADSIQALEGMEHVRMRPSMYIGDTGVRGLHHLVYEVVDNSIDEALAGHC
DTIFVAINEDNSITVEDNGRGIPVDIHKKEGVSALEVVMTKIGAGGKFDKDSYKVSGGLH
GVGVSCVNALSDHLKATVHREGKIYEQEYERGKALYPVKQIGTTDKRGTIVTFKPDGTIF
QQTLVYSYETLAARLRELSFLNKGITITLTDKRELDDKGNPVSETFHSQEGLKEFVKFLD
GNRVPIIGHVISMENDKGEIPVEVALIYNESYTENIFSYVNNINTHEGGTHLQGFRMGLT
RTLKKYADASGLLDKLKFEISGDDFREGLTAIISVKVAEPQFEGQTKTKLGNREVVSPVS
QAVAEMLENYLEENPNDAKIIVQKVILAAQARHAAKKAREMVQRKTVMGGGGLPGKLSDC
SEQDPAKCEIFLVEGDSAGGTAKQGRDRFFQAILPLRGKILNVEKAMQHKVFENEEIRNI
FTALGVTVGTEEDSKALNLSKLRYHKVVIMCDADVDGSHISTLILTFFFRYMKELIEGGH
VYIAQPPLYQVKKGNKKAYAWNDDQRDRISMEFGGGTNVQRYKGLGEMNAEQLWETTLNP
EFRTLRQVTIDSLSEADRVFSMLMGDEVPPRRDFIEKNAAYAKIDA

NT seq 1941 nt +upstreamnt +downstreamnt
atgagcgacgaagtaaaaaagaacaattattcggcagatagtattcaggcgttggaagga
atggagcacgtacgtatgcgtccatccatgtatattggagatactggagtaagaggttta
catcacttagtatatgaagttgtagataactcaattgatgaggctctagctggacattgt
gatactatttttgtagcaattaacgaagataattctatcacggttgaagataatggtcgt
ggtattcccgtagatattcacaaaaaagaaggtgtttctgctttagaagttgtaatgact
aaaattggagcaggaggtaagtttgataaagattcttataaagtttcaggaggtcttcac
ggggtgggggtttcgtgtgtgaatgctttatcggatcatttgaaagctactgttcataga
gaaggtaaaatttatgagcaagaatacgaaagaggaaaagcattatatccggttaaacaa
atagggacaacagataaaagaggtacaattgtaacttttaaacctgatggaactattttt
caacaaacactagtgtattcttatgaaacattagctgcacgtttacgtgaattatcgttc
ttaaataaaggaattacaattactttaacggataaaagagaattagatgataaaggaaat
cctgtttctgaaacatttcattctcaagaaggtttgaaagaatttgttaagtttttagat
ggaaaccgtgtgccaatcattggacatgttatttcaatggaaaatgacaaaggtgaaatt
ccggttgaagtagccttgatttacaacgaaagttacacagagaatattttctcttacgta
aataacattaatacgcatgaaggaggtacacatttacaaggattccgtatgggattaacc
cgtaccttgaaaaaatatgctgatgcttctggattattagataaattaaaatttgaaatt
tcaggagacgatttccgtgaaggtttaactgcaattatttctgtaaaagtagctgaacct
caatttgaaggtcaaactaaaaccaaattaggaaatagagaagtagtttctcctgtatct
caggcggtagctgaaatgcttgaaaattacttggaagaaaatccaaatgatgccaaaatc
atcgttcaaaaagtaattttagccgctcaagcacgtcatgcagctaaaaaagctcgtgaa
atggtacaacgtaaaaccgttatgggcggtggaggactaccaggtaaattgtctgattgt
tcggaacaagatccagcaaaatgtgaaattttcctagttgagggagattcagcgggtggt
acagctaaacaaggtcgtgatcgtttcttccaagctattctacctttaagaggtaagatt
ttgaatgtggaaaaagccatgcaacacaaagtgtttgaaaatgaagaaattcgaaatatt
ttcaccgcattaggagtaacagtgggtactgaagaagacagcaaagctttaaatttatct
aaattaagataccataaagtagtaatcatgtgtgatgccgatgtcgatggttctcacatt
tctacacttattttaacgttcttcttccgttatatgaaagaattgatagaaggaggacat
gtttatattgctcagccaccgttataccaagtgaaaaaagggaacaaaaaagcctatgct
tggaacgatgaccaacgcgatagaatttcaatggaatttggtggaggtactaatgtacaa
cgttataaaggtcttggggaaatgaatgctgaacaattatgggaaactactttgaatcct
gaatttagaacattacgtcaagtaactattgatagtttgtctgaagcggatagagtgttt
tctatgttaatgggtgatgaggtaccacctcgtagagacttcattgagaaaaatgcggct
tatgccaaaattgacgcttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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