KEGG   Fischerella sp. NIES-3754: FIS3754_04540
Entry
FIS3754_04540     CDS       T04195                                 
Name
(GenBank) group 2 sigma 70-type sigma factor
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
fis  Fischerella sp. NIES-3754
Brite
KEGG Orthology (KO) [BR:fis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fis03021]
    FIS3754_04540
Transcription machinery [BR:fis03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FIS3754_04540
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r4_2 HTH_Tnp_ISL3 HTH_28 HTH_25 HTH_24 HTH_23 HTH_17 Put_DNA-bind_N
Other DBs
NCBI-ProteinID: BAU04566
UniProt: A0A0S3THJ8
Position
complement(488681..489667)
AA seq 328 aa
MMPICNITTTSNIKFSTDIVRNYLQDIVRVPLLTHEEEIVYSKQVQQMITLQNKKETLQK
QLNHEPSQKELAQYVQLSEMEVKEIFQKGTQSKQKMMVANLRLVVSIAKKYQGRNVEFMD
LIQEGSLGLERGVEKFDPTRGYKFSTYAYWWISQGMTRAISQQSRTIRLPIHLTEKLNKF
KKVQRELSQKLKRSPSVPEIAEKMKLNPAQIRELLMISRQPVSLDKQVGDNEDTELQELL
TEVPEASPEIQVTQNLMRQDIYLSLRELTPQQQQVLILHYGLEDNCELTLTQVAQHLNIS
ERRVRYIEKQALSYLRRCHTNLQHYIFS
NT seq 987 nt   +upstreamnt  +downstreamnt
atgatgccgatttgtaacatcacaacaacgtcaaatattaaattcagcacagatatagtt
cgtaattatctgcaagatattgttcgtgtaccattgttgactcatgaggaagaaattgta
tatagcaaacaggtacagcagatgattacgttacaaaataaaaaggaaactttgcagaaa
caactcaatcacgaaccatctcaaaaagaattagctcaatatgtacaacttagtgaaatg
gaagtgaaggaaatttttcagaaaggtacacaatcaaagcaaaaaatgatggtagcaaat
ctccgtttagtggtttctatcgccaaaaaatatcaaggacgaaatgtggagtttatggat
ttaattcaggaaggttcattaggtttagagcgtggtgtagagaaatttgaccccactcgt
ggctataagttttctacctatgcttattggtggattagccagggaatgacacgagcaata
tctcagcaatcacgaactattagactgccaattcatcttaccgaaaagttgaataaattt
aaaaaagtgcaaagagaattatctcaaaaattaaagcgtagtcctagtgtacctgaaatt
gcagaaaagatgaaattaaaccctgctcaaatccgcgaactgctgatgatatctcgtcaa
cctgtctcattagataaacaagtgggcgataacgaagacacagaattgcaagaactttta
acagaagttccagaagcctcgcctgaaatccaagtaactcaaaatttaatgcgtcaagat
atctatctctcgctgagagaattaactccacagcagcaacaagtcctaattttgcattat
ggcttggaagataattgtgaactcactttgacgcaggtagctcaacatctcaacattagt
gagaggagagttcgttatatagaaaaacaagcactgagttatctccgtcgttgccacaca
aatctacaacactatattttcagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (23)   

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