KEGG   Candidatus Filomicrobium marinum Y: BN1229_v1_2852
Entry
BN1229_v1_2852    CDS       T03857                                 
Symbol
uvrA
Name
(GenBank) ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC
  KO
K03701  excinuclease ABC subunit A
Organism
fiy  Candidatus Filomicrobium marinum Y
Pathway
fiy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fiy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BN1229_v1_2852 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fiy03400]
    BN1229_v1_2852 (uvrA)
DNA repair and recombination proteins [BR:fiy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BN1229_v1_2852 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BN1229_v1_2852 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_16 nSTAND1 AAA_25 DnaJ_CXXCXGXG RsgA_GTPase APS_kinase AAA_21
Other DBs
NCBI-ProteinID: CPR20986
UniProt: A0A0D6JHG3
Position
1:complement(2771912..2774983)
AA seq 1023 aa
MAKQRKTGGALTPQPMAGVIHVRGAREHNLKNVDLTIPRDSLVVFTGLSGSGKSSLAFDT
IYAEGQRRYVESLSAYARQFLQMMQKPDVDHIDGLSPAISIEQKTTSKNPRSTVGTVTEI
YDYLRLLFARVGVPHSPATGLPIESQTVSQMVDRVLALEAGTRLYLLAPIVRGRKGEYRK
ELAELQKKGFQRVKIDGTFYEIPDAPALDKKYKHDIDVVVDRVVVRPDMASRLADSFETA
LDLADGIAIAEFADKPLSAEKSGGAEGKAAGKDKDTGILRNKNETHERVVFSARFACPVS
GFTIDEIEPRLFSFNAPAGACPVCDGLGTELQFEPDLVVPDATLSLADGAVYPWAKTGAT
SPYYEQTLDALAKHYGVSMRTPWERLPKHVQLAILFGSGEEEIAFIYEDGVRRYKTEKPF
EGVIGNIERRWRETESDWVREELSRYQGAHPCEACGGYRLKPQALAVKIAGLHIGETVEM
SVKAADEWFSTLPEKLTKKQNEIAGRILKEITERLRFLNDVGLEYLTLSRNSGTLSGGES
QRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLVTLKHLRDLGNTVLVVEHDEDAIL
SADHVVDMGPGAGVHGGEIVAQGTPDEIKASKPSLTGQYLTGVRNVPVPSVRRQPQKGRT
LSVVGARSNNLQNVTAEIPLGLFVCITGVSGGGKSTLLIDTIYKAVARRLNGARDNPGEH
DRIVGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFTPIREWYANLPEAKARGYAPGRFSF
NVKGGRCEACQGDGVIKIEMHFLPDVYVTCDQCNGKRYNRETLEVRFRDKSIADVLDMTV
EEGAEFFKAVPSIRDKLETLTRVGLGYIRVGQQATTLSGGEAQRVKLAKELSKRATGRTL
YILDEPTTGLHFHDVAKLLEVLHELVDAGNTVAVIEHNLEVIKTADWIIDLGPEGGDGGG
RIVVTGTPEVVAAEDASYTGRYLKDLLQRRGKTPAKPPDSDAKKPAPKRKTSSGRRTRRQ
AAE
NT seq 3072 nt   +upstreamnt  +downstreamnt
atggcaaaacaacgtaagaccgggggcgctctgacgcctcagcctatggctggcgtcatt
cacgtgcgtggcgcgcgtgagcacaacctgaagaacgtcgacctcacgatcccgcgcgac
tctctcgtcgtgtttacgggactatccggctcgggcaaatcgtctctcgcgttcgacacc
atctacgcggaaggccaacgccgttacgtcgaaagcctgtcagcctatgcgcgccagttt
ttgcagatgatgcagaaacccgacgtcgatcacattgatggtctgtctcccgccatctcg
attgagcaaaagacgacttcgaagaacccgcgctcgactgtcggcaccgtaaccgagatc
tacgactatctgcgtttgctgtttgcgcgggtgggtgtcccgcattctccggcgacgggc
ttacccattgagagccagacggtcagccagatggtggaccgggtgttggcgctagaggca
gggacccgtctttatctgctggcgccgatcgtgcgcgggcgaaaaggcgaataccgcaaa
gagctcgccgaacttcagaagaagggcttccagcgggtcaagatcgacgggactttctat
gagatcccggacgcgcccgctctcgacaagaaatacaaacacgacatcgacgtcgtcgtg
gatcgcgtggtcgtgcggcccgatatggcgtcgcggctcgcggacagttttgaaaccgcg
ctcgatcttgctgatggcatcgcgattgcggaatttgccgataaacctctctcagctgaa
aaatccggtggtgcggaaggcaaggccgcaggtaaggacaaggacaccggcatccttcgt
aataagaacgaaacgcacgaacgcgttgtcttctccgcacgctttgcttgtcccgtgtcc
ggtttcacgattgacgagatcgagccacgtttgttttcgttcaacgcgcctgcgggtgct
tgtcccgtgtgtgatggtctcggtacggaactgcaattcgagcctgacctcgttgtgcct
gacgcaacgctttctctggccgatggcgctgtctacccatgggccaagacaggcgcgacg
tcaccttattacgagcaaacgctggatgctctcgccaagcactacggggtgtcgatgcgc
acaccgtgggagcggctgcctaagcacgtacagctagccatcctcttcggctctggcgaa
gaggaaatcgcgttcatctacgaagacggggtccggcgctacaaaaccgagaaaccattt
gagggcgtcatcggcaatatcgagcggcgctggcgggagacggagtccgattgggttcgc
gaagagctgtcgcggtatcaaggcgcgcatccgtgcgaagcctgcggcgggtatcgtctc
aagccgcaagccctagcggtcaagatcgctggactgcacatcggtgagaccgtcgagatg
tccgtgaaggctgcggatgagtggttctcgacgctgcccgaaaagctgacaaagaagcaa
aacgaaatcgccggacgcattctcaaggagatcaccgagcggttgcgttttctcaatgac
gtcggtctcgaatatctcacgctgtctcgtaattccggaactctatcgggcggtgagagc
cagcgtatccggctcgcgagccaaattggttccggacttacgggcgtgctttatgtcctc
gacgaaccgtcgatcggcttgcatcaacgcgataacgaccggcttttggtgacgctgaaa
catctgcgcgatctgggcaatacggtgctcgtggttgagcatgacgaggatgccatcctc
agcgccgaccatgtcgttgatatgggtcccggagccggcgtgcatggcggcgagatcgtt
gcacaaggcacgccggatgaaatcaaggcttcaaaacccagcctaaccggccagtatctg
actggggtgcgtaacgtccccgtaccttcggtgaggcgtcagccgcaaaagggacggacg
ctttccgtcgtcggtgcgcgttccaacaatctgcagaacgtcacggcagaaattccgctc
ggcctgtttgtgtgtatcacgggcgtttcgggtggcggcaagtccaccctcctgatcgat
acgatttacaaggccgttgcccgacgcctcaacggcgcgcgagacaaccctggtgaacat
gaccgtatcgttggcctcgaacatctcgacaaggtgatcgacatcgatcagtcaccgatt
gggcggacaccaagatcgaacccggcgacgtatacgggcgcattcacacccatccgcgaa
tggtacgccaatttgccggaggccaaggcccgcgggtacgcgcctggccgcttttccttc
aacgtgaagggcggacgctgcgaagcgtgccagggcgacggcgttatcaaaatcgagatg
cacttccttcccgacgtctacgtcacgtgcgaccagtgcaacggcaagcgctataatcga
gaaacgcttgaagtgcgcttccgcgataaatcgattgccgacgttctcgacatgaccgtc
gaagagggtgccgagttcttcaaggcggtgccgtcaatccgcgacaagctcgagacgctg
acccgcgttggattgggctacatcagggtcggtcaacaggcgacgacactatccggcggc
gaagcccaacgcgttaaactcgccaaggaactttccaagcgtgccacgggtcgaacgctt
tatatcctcgacgagcctacaaccgggctgcatttccacgacgtcgccaagcttttggaa
gttctccatgaactcgttgacgccggcaacaccgtcgccgtcatcgagcacaatctggag
gtgatcaagactgcggactggatcatcgacctcggcccggaaggcggcgacgggggcggg
cgtatcgtcgtaaccgggactccggaagttgtagcggcggaagatgcgagttacacagga
agatatctgaaggatcttctgcagcggcgcggcaagacaccagccaaaccgccggatagc
gacgcaaaaaagcccgctccgaagcgcaagacttcttccgggagacggacaaggcggcag
gcagccgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (20)   

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