KEGG   Flavobacterium anhuiense: BB050_02761
Entry
BB050_02761       CDS       T04718                                 
Name
(GenBank) Putative DNA ligase-like protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
fjg  Flavobacterium anhuiense
Pathway
fjg03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:fjg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    BB050_02761
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fjg03400]
    BB050_02761
Enzymes [BR:fjg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BB050_02761
DNA repair and recombination proteins [BR:fjg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BB050_02761
SSDB
Motif
Pfam: LigD_Prim-Pol LigD_N DNA_ligase_A_C DNA_ligase_A_M RNA_ligase DNA_primase_S mRNA_cap_enzyme Alpha_TIF DUF4817
Other DBs
NCBI-ProteinID: AOC95856
Position
complement(3090763..3093324)
AA seq 853 aa
MSLSKYNQKRDFKQTREPKGKIEKSASELIFVVQKHAASHLHYDFRLEMDGVLKSWAVPK
GPSMDPEVKRLAMMVEDHPYSYKDFEGTIPEGNYGAGDVIVWDNGTYTSDEKTASDEKKL
LSDLAKGHLSFILKGKKLKGEFSLVKLHGKQENAWLLIKKNDKYASEEDILEKNKSVISK
RSLEQLVEKSEKLTSKSEEKTTEKKAVKKKSNPKADIAEFLKPMLASVSEKPFDDDEWIF
ENKYDGYRTIAVINPQQVDLFSRNELSFNANFKPIAEELKQIDHTVVLDGEIVVENDAGR
ADFQLLQNYMKTGIGNLKYYVFDLLNLDGNLITELSLLERKELLKILFNKYPFSNVSYSE
HTLGDGIKQFEKAVKNKTEGIIAKRADSTYTINRRSTNWLKIKTANEEEAIIIGITEPRN
SRKYIGALLLGQYDGKKLQYIGKCGTGFTESTLKDLYTKLEPLFTAKSPLDEKIPIRDKI
QWVNPKVVCQVKFSEWTQDQHLRHPVYLGIRIDKKAEEVFLSFPKDDSTQLNSDEMTITP
ENKKEKTENDYDLKVGKTVLHLTNQNKVYFPKDGITKGDIIHYYNEVSELILPYLKDRPE
SMNRFPNGIDSPSFYQKDVDVDKIPKWLKTKKVFSESNNADIDYLICNNKETLLYMANLG
CIEMNPWNSTTKHIQNPDWLVIDLDPAGNDFAPVITTALVVKEVLDELETECLCKTSGAS
GLHIYIPLGAKYDYDSIKILGELIAKEVQSRLPDITSIERSIKKRKNKLYIDFLQNRRGQ
TLAAPYSVRPKPGATVSTPLEWSEVNEKLHPSQFTIKNVLKRFEKKGDLWTPVLSKGADI
KKIIHKLEENQNV
NT seq 2562 nt   +upstreamnt  +downstreamnt
atgtcactgtctaaatacaatcagaaaagagattttaaacaaacgcgtgaaccgaaagga
aaaatcgaaaaatcagcaagcgagctaatttttgtcgtgcagaaacatgctgcgtcacat
cttcattacgattttaggttagagatggacggtgttttaaaaagctgggcagtgccaaaa
ggcccgtcgatggatcctgaagtgaaacgtctagctatgatggtcgaagatcatccgtac
agctataaagattttgaaggcaccatcccagaaggaaattacggtgctggagatgtaatt
gtatgggataacggaacctatacttctgatgaaaaaacggcttctgacgaaaaaaaatta
ttgagcgatctggcaaaaggacatttgagttttattttaaagggcaaaaaattgaaaggt
gaattttctttagtcaagcttcatggaaaacaagaaaatgcttggctgctaattaagaaa
aatgataaatatgcttctgaagaagatattttagagaagaataaatcggttatttctaaa
agaagtctagaacaattggttgaaaaatctgaaaagctcacttcaaaaagcgaagagaaa
actactgagaaaaaagcagtaaaaaaaaagtccaacccaaaagctgacatcgccgaattt
ttaaaacccatgcttgccagcgtaagcgaaaaaccttttgatgatgacgaatggattttt
gaaaataaatacgacggctacagaacgattgccgttattaatccgcaacaggttgatttg
ttcagcagaaacgagctttcttttaatgctaatttcaaacccattgccgaagaattaaaa
caaattgaccacactgtagttttggatggcgaaattgtagtagaaaatgatgctggaaga
gccgattttcagctgcttcaaaactatatgaaaacaggaatcgggaatctaaaatattat
gtttttgatttattgaatttggacggaaatctcattacggaactctctttattggaaaga
aaagaactgctcaaaattctctttaataaatatcctttttctaatgtttcttattctgaa
catacccttggcgacggaattaaacaatttgaaaaagccgttaaaaataaaactgaaggc
attattgccaaaagagcagacagcacttacactataaatcgaagaagcaccaactggctt
aaaataaaaacagcaaatgaagaagaagctattataatcggcattaccgaaccgcgaaat
tccagaaaatatattggcgctcttttactcggacaatacgatggcaaaaaactgcaatat
attggcaaatgcggaactggttttacagaaagcacgctaaaagatttatataccaaacta
gaaccgctatttacagccaaatctccgcttgacgaaaaaattccgatacgcgataaaatt
cagtgggtaaatccaaaagtggtgtgtcaggttaaattttcagaatggactcaagatcaa
catttaagacatcccgtttacctcggaattcgaattgataaaaaagcagaggaagttttt
ttatcattcccaaaagacgattcaactcaactaaattcagatgaaatgacaattacacca
gaaaataaaaaggaaaaaacagaaaacgattacgatttaaaagtcggaaaaacagttttg
catcttactaatcaaaacaaagtctatttcccaaaagacggcatcactaagggcgatatt
attcattattacaatgaagtttcagaattgattctgccttatttaaaagaccgtccagaa
tcaatgaaccgttttcctaacggaattgattcgccgagcttctatcagaaagatgttgat
gtagataaaattccgaaatggctcaaaaccaaaaaagtcttctcagaatctaataatgcc
gacatcgattatctcatctgtaataataaggaaacattgctttatatggcaaatttgggc
tgtatagaaatgaatccgtggaactcgacaaccaaacacattcagaatccagattggctg
gtaattgatttggatcctgcaggaaatgattttgctcctgtgataacaaccgctttggtg
gtgaaagaagttttagacgaattggaaaccgaatgtttatgtaaaacttcgggtgcttct
ggactgcatatctatattccgcttggcgcgaaatatgattatgattccataaaaattctt
ggcgaattaatagcaaaagaagtgcaatccagacttccagatattacttcaattgaaaga
agcatcaaaaagagaaaaaataaactgtacatcgatttcttgcaaaaccgacgtgggcaa
actttagcggccccgtattctgttcgaccaaaacctggcgcgacagtttctacgcctttg
gaatggagcgaagtgaatgaaaaactgcatccgtcgcaatttaccatcaaaaatgtcttg
aaacgttttgagaaaaaaggagatttgtggactcccgttttatcaaaaggagccgatatt
aaaaagattattcacaaactagaagaaaatcaaaacgtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (24)   

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