KEGG   Flavobacterium johnsoniae UW101: Fjoh_0487
Entry
Fjoh_0487         CDS       T00508                                 
Name
(GenBank) Radical SAM domain protein
  KO
K10026  7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
Organism
fjo  Flavobacterium johnsoniae UW101
Pathway
fjo00790  Folate biosynthesis
fjo01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:fjo00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00790 Folate biosynthesis
    Fjoh_0487
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fjo03016]
    Fjoh_0487
Enzymes [BR:fjo01000]
 4. Lyases
  4.3  Carbon-nitrogen lyases
   4.3.99  Other carbon-nitrogen lyases
    4.3.99.3  7-carboxy-7-deazaguanine synthase
     Fjoh_0487
Transfer RNA biogenesis [BR:fjo03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Fjoh_0487
SSDB
Motif
Pfam: Radical_SAM Fer4_12
Other DBs
NCBI-ProteinID: ABQ03522
UniProt: A5FMQ1
Position
complement(509874..510506)
AA seq 210 aa
MLPKEIQLEVNKGAMLPLMEEFYTIQGEGFHTGTAAYFIRIGGCDVGCHWCDVKESWNAE
LHPPTNIDIIVNNASSYANTVVVTGGEPLTWDMTLLTQQLKDKNLKVHIETSGAYPLSGT
WDWICLSPKKNKLPTPDVYANAHELKVIIYNKHDFIFAEEQAELVNDNAILFLQPEWSKK
EEMTPLIVDYVMNNPKWRVSLQTHKYLNIP
NT seq 633 nt   +upstreamnt  +downstreamnt
atgttaccaaaagaaatacaattagaagtaaataaaggagcgatgctgcctttgatggag
gaattttataccattcagggtgaaggttttcataccggaactgctgcttacttcattaga
attggaggctgcgatgtggggtgtcattggtgtgatgtgaaagaaagctggaatgcagaa
ctgcacccgccgactaatatcgatataattgtaaataatgcttcaagttatgctaataca
gttgtagttaccggtggggaaccgcttacatgggatatgactttgttaacacagcagtta
aaagataaaaacttaaaagttcatattgaaacctccggggcttatccattatctggaacc
tgggactggatttgtctttcaccaaagaaaaataaacttccaacacctgatgtctacgct
aatgcgcatgaattaaaagtgattatctataataagcatgattttatttttgccgaagaa
caagcagagctggtaaatgataatgctattttattccttcagccggaatggagtaaaaaa
gaagaaatgacgccgctgattgtagattatgttatgaataatcctaaatggagagtttct
cttcaaactcataaatatctaaacattccttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system