KEGG   Flavisolibacter tropicus: SY85_02375
Entry
SY85_02375        CDS       T04392                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
fla  Flavisolibacter tropicus
Brite
KEGG Orthology (KO) [BR:fla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fla03032]
    SY85_02375
   03400 DNA repair and recombination proteins [BR:fla03400]
    SY85_02375
Enzymes [BR:fla01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     SY85_02375
DNA replication proteins [BR:fla03032]
 Prokaryotic type
  DNA Topoisomerases
   SY85_02375
DNA repair and recombination proteins [BR:fla03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SY85_02375
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4
Other DBs
NCBI-ProteinID: ANE49516
UniProt: A0A172TR98
Position
complement(584963..587542)
AA seq 859 aa
MAKNLLIVESPAKAKTIEKILGSDFEVKSCYGHIRDLEKDDMGIDIQNGYRPKYIVPDEK
QRVVSELKQLARKSGEVWLATDEDREGEAISWHLCEVLGLDPKTTKRIVFHEITKPAIQK
AVKQPRTVNMDLVNAQQARRVLDRIVGFELSPVLWRKVSMKNNLSAGRVQSVAVRIIAER
EREINAFVTQSSFKIEAIFTATDSAGKSISFKAEGSKFNNAADAETFLQQCIGANYAVKD
IQVKPAKRTPAAPFTTSTLQQEASRKLGYSVSRTMLVAQKLYEHGHITYMRTDSVNLSET
AMEDIRNTIKSSFGDKYYQSRKYKNKNESAQEAHEAIRPTYMQHTTVSDPDAKRLYELIW
KRTMASQMSDAELEKTIAKINVSTNNAELSAEGEVLKFDGFIKVYREDVDDEDGETSGQE
SMLPPLAKGQQLPLKEMKAIERYTRPLPRYTEASLVKKLEELGIGRPSTYAPTISTIQKR
GYVEKRDKEGVQRNYQVLTLSGDKISKKTETENTGAEKGKLFPTDLGLVVTDFLKQYFDD
IMDYGFTARIEGEFDDVAQGKMRWNKMIDDFYNPFKDDVQKTIETAERVKGEREVGYDPQ
SGKPVIARMGRYGPMVQIGTTEDEEKPRFARLKQNQSIETINLDEALDLFRLPLTLGEYN
GLEVAVNAGRFGPYVKYGEDFISLPKGVEPLEVDMEQAIELINQKQIADAPIGHYEGKPV
TKGKGRFGPFIKWNELFINVPKAYNFDALTQHDINELIEKKVEKEANRFIQQWPSEKISI
ENGRWGPFIRFGKKMLKLGRKANNEKYTEDEVKSLPLEDVKKMIEEQVPGAFAKKTAAKK
TAAKKAAPKKAAAKKSSKK
NT seq 2580 nt   +upstreamnt  +downstreamnt
atggcgaagaatttgttgattgttgagtcgcctgcaaaggcaaaaaccatagaaaagatc
ctggggagcgattttgaggtaaagagttgctatggccatattcgtgacctcgagaaggat
gacatgggtattgatattcaaaacggttaccgtccaaaatatatagtacccgatgagaaa
cagcgggttgtaagcgaactgaaacaactggccagaaaaagtggcgaagtgtggttggca
acggatgaggaccgtgaaggagaagctattagctggcatttatgtgaagtattgggcctt
gatcctaaaacgaccaagcgcattgttttccacgagatcactaagcctgccattcaaaaa
gccgttaagcagcctcgcactgtaaatatggacctggtaaatgcgcaacaggcacgtcgt
gtactggatcgcattgtaggttttgagttaagtcctgtgttatggcgtaaggtaagcatg
aagaacaacctgagtgccggacgtgtacagagtgtagcggtgcgcattattgctgaaaga
gagcgtgagatcaatgcttttgttacacaaagcagctttaagatagaggcaatttttacg
gcaacagattcagctggaaaatctatttcgtttaaagcagaaggttctaagtttaataat
gctgcagatgctgaaaccttcttacaacaatgtataggtgctaactatgcggtaaaagac
attcaggtaaagcctgctaaacgtactccagcagccccctttactacttctaccctacag
caggaggctagccgtaagttgggctatagtgtaagccgtacgatgctggtagcacagaag
ctatatgagcatgggcatatcacctatatgcgtactgatagtgtcaacctgagcgaaaca
gcgatggaggacattcggaacacgatcaaatccagctttggtgataaatattatcagtct
agaaagtataagaataaaaatgagtcggcgcaagaggcacacgaagccattcgcccgact
tatatgcaacatacaaccgtaagcgacccggatgctaaacgtttatatgaactgatctgg
aagcgtaccatggctagtcaaatgtctgatgcagaattggagaagacaattgctaagatc
aatgtgtctaccaacaatgcggaattaagtgctgaaggagaagtgctaaaatttgatggt
tttataaaggtatatcgcgaagatgtagacgatgaggatggcgaaacttcaggtcaggaa
tcaatgctgccaccacttgccaaaggacagcagctgcccttaaaggaaatgaaagccatt
gagcgctatacgcgtccattgcctcgctatacggaagcttcccttgtaaaaaaactagag
gaactgggaattggacgtccatctacttatgcgcctactatttcaaccatccaaaaaaga
ggttatgtagaaaagcgtgacaaagaaggtgtacaacggaattatcaggtattgaccctt
agtggcgataagatctctaaaaagaccgaaactgaaaatacaggtgctgaaaaaggtaag
ctcttccctactgacttaggtttggtagtaacagatttcctgaaacagtactttgatgat
attatggattatggctttacagcgcgtattgaaggtgagtttgatgatgtggcccaaggt
aaaatgcgctggaataaaatgatcgatgatttctacaatccctttaaggatgatgtacag
aaaacgattgagactgccgagcgcgttaaaggtgagcgtgaagttggatacgatccgcaa
agcggtaagccggtgattgcccgtatgggacgttatggtccaatggttcaaattgggaca
actgaagatgaagagaagcctcgttttgcccgcttaaagcaaaatcaaagtattgaaacc
atcaacttagatgaggcattggatctgtttaggttgccgttaacacttggtgaatataat
ggccttgaagtggcagtgaacgcaggccgatttggtccctatgtaaaatatggtgaagac
tttatttccttacctaagggtgtagagccattggaagtagacatggaacaggcgattgaa
ttgatcaatcaaaagcaaatagctgatgctccgataggccactacgaaggtaagcccgta
accaaagggaaaggccggtttggaccttttattaagtggaatgaactatttattaatgtt
ccaaaggcttacaattttgacgctctgacgcagcatgatattaatgagctaattgagaaa
aaagttgaaaaagaagctaaccgctttattcaacagtggccgtcggaaaagatctccata
gaaaacggccgttggggtccctttatccgttttggcaagaaaatgttgaagctgggaaga
aaagcaaataatgagaaatatacggaagatgaagtaaagagcttgccgttagaagacgtt
aaaaaaatgattgaagagcaagtacctggagcgtttgctaaaaaaacagctgccaagaaa
actgcagcaaaaaaagcagctcctaaaaaggcagctgccaagaagtcctctaagaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (48)   

Download RDF
DBGET integrated database retrieval system