KEGG T04442: MY04

Flammeovirga sp. MY04: MY04_1944

Entry

MY04_1944         CDS       T04442

Name

(GenBank) AAA family ATPase

K10742

DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]

Organism

flm Flammeovirga sp. MY04

Pathway

flm03030

DNA replication

Brite

KEGG Orthology (KO) [BR:flm00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MY04_1944
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:flm03032]
    MY04_1944
Enzymes [BR:flm01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     MY04_1944
DNA replication proteins [BR:flm03032]
Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MY04_1944
Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MY04_1944

SSDB

Motif

Pfam:

AAA_11 AAA_12 AAA_19 AAA_30 UvrD-helicase Dna2 ResIII PDDEXK_1 AAA_22 PhoH DEAD Helicase_RecD AAA_16 SLFN-g3_helicase AAA_7 nSTAND3 Terminase_6N AAA_6

Other DBs

NCBI-ProteinID:

ANQ49318

Position

1:2424283..2427708

AA seq 1141 aa
MLKAEDYYQYLSQQIEDDSYSNLEKHHKIKDLLEWICKEETKGEKVLLSSLFSRIAFISQ
KKKLPELLSWRLQKIRINDRQSKRSTKFISDHDVQFAARGVAELIKEVHGVIIPEKLDHS
LPELPSEELVNRHKENTIEVLKVEVLRIDTDHNRIICLEDDEENETTAPLEVRFNVSGYN
DIYTAFIHKLWENAQLLLINARMEEDDSVSPQHFVLEPDYLIDVTAVAECFSRNTTIPLM
HLLKKFSTSTSSSAMLLGNVANYFLDEAIHSEDTDILDFRDVFTKTFKASPLEYITLDEL
QTKDGFNTFMKKAEDQFNNIKRTIKEDFLQQNIYKDGCIIEPSFYSPKYGLQGRLDLLHI
NQHQKEFRIVELKSGTPPQVGFGNSGLWINHQVQTLMYQMILRDAYNVESKQVFPYIFYS
KTIQSPLRFDTFTLKLEQSILLTRNEIVLNELKLSKAETLQEVHKVICQLNESAFAGAPP
FTKTEVNEFIRNLKGLNRMEKAYLYAFTSFISKEQQLSKVGDTIFNQGAAALWKDDFEEK
KDSFKIFFDLEVTGNYANEPVPELIFKRTNEENAFVNFRVGDIVTIYPRQSADTIPTQGQ
INRGTITFISNSEVRVQLRHRQRNSEIYDADTKWALEGDFIEASFNSMYRGIFNFISWEN
KEKKARLLGLNPPKYPDKMYTHEEVKSLAQDKNLNETELSTLSKALSTEDYCLVVGPPGT
GKTSRMLKNLAHILHKTDKTRNILFVAYTNRAVDEICEALDEAIETPLEDGRKFLRIGSE
HSCSPQWKENLMHNLAQNANNRKMLRNGIEQHRIFVSTLASIAGRSSLFKIKQFDMAVID
EASQILEPQIVSLLTKVNRFVLIGDQKQLPAITQQDPVLSEIDFEELKEIGLTDRRTAYF
ERIYALCQKNNWHWAFDRLKNQGRMHEVLGNFANQQFYQGNLTTVPLPWQSASFEWDQLP
EYSDLEKLLVERRLLFFPTTGKNTSTSDKINMEEARKIAKVAVATRKRYLEQKGSFDIDK
TLGIIAPYRNQIAAIRQALEEEGFEDAHLLSIDTVERYQGSQREVILISFCANTPFQLEG
MISLTSDHKVDRKLNVAITRAKQQMIFFGNPYILMRSSIHESLMNWVRDQKGWIDNDNLL
F

NT seq 3426 nt +upstreamnt +downstreamnt
atgcttaaggcagaagattattatcagtatttatcacaacaaatagaagacgattcttac
tccaacttagagaaacaccacaaaatcaaagatttactggaatggatttgtaaagaagag
accaaaggagaaaaagtgttattatccagccttttctcacgaattgcctttatcagtcag
aaaaaaaagctgcctgaattgctgagttggcggttacaaaaaatccgtatcaacgatagg
caatccaaaagatctaccaaatttatttcagatcacgatgtacaatttgcggcaagaggt
gttgccgagttaatcaaggaagtacatggtgttatcataccagaaaaattagaccattcc
ttaccggaattaccttccgaagaattggtcaacagacataaggaaaataccattgaagta
ttaaaagttgaagttttaagaattgatacagatcataaccgcatcatatgtctggaagat
gatgaggagaacgaaactactgcccctttagaagttcgatttaacgtttctggttataac
gatatttataccgcatttatccataaactttgggaaaatgcacagttactgttgatcaat
gcacgcatggaggaagatgatagtgtttctccacaacattttgttttagagcccgattac
cttattgatgtaacggctgtagctgaatgttttagtagaaatacgaccattcctttgatg
caccttttgaagaaattctcgacttcaacaagttcttctgctatgttattgggtaacgta
gctaactattttttagacgaggccatacattcagaggatactgatatactcgattttaga
gatgtatttacgaaaacgtttaaagcgagtccattggaatatatcactttagacgagctt
cagaccaaagacggttttaatacgttcatgaagaaagctgaggatcagtttaacaatatc
aaaaggacgattaaagaagattttctacagcagaatatttataaagacgggtgcattatt
gaaccttccttctattctcctaagtatggattgcaaggtcgattggacttgttgcacatc
aatcaacatcaaaaagaatttaggattgttgaattaaaatcgggaactcctcctcaagtt
ggttttggcaactcgggtctttggatcaatcatcaagtacaaactttgatgtatcagatg
atattaagagatgcttataatgtagaaagtaagcaagtcttcccctatattttctattcg
aaaaccattcaatcccccctacgatttgataccttcactttaaaattggaacaaagcatt
ttgctgacaaggaatgagattgttctaaacgaattgaagctatccaaagctgaaacttta
caagaagtgcataaagtgatttgtcagttaaacgaatctgcttttgcaggggcacctcca
tttaccaagacagaagttaacgaattcattcgaaatcttaagggattgaatcgaatggaa
aaggcgtatttatatgcttttacgagctttatttcgaaagagcaacaattgtcgaaagtt
ggggatacgatctttaatcagggagcagctgccttgtggaaagacgatttcgaggaaaag
aaagatagtttcaaaatattctttgatcttgaggtaaccggcaattatgccaacgaacct
gtgcctgaactcatctttaaacgtaccaatgaggagaatgcatttgtcaactttagagtg
ggcgatatcgtaacgatttatcctagacaaagtgcagataccattcccactcaaggtcag
attaacagaggaaccatcacgtttatatcaaatagtgaggtgagagtacagttaagacac
cgacaaagaaactcagaaatttatgatgctgataccaagtgggctttggaaggcgacttt
attgaagcatcatttaattcgatgtatagaggaattttcaattttatcagttgggaaaat
aaggaaaagaaagcacgtttactgggcttaaatcctccaaaatatcctgataaaatgtac
actcatgaggaagtgaaatcgcttgctcaggataaaaacttaaacgaaacagagctatcg
accttatcaaaagcattgtcaacagaagattattgtttggtcgttggccctcctggtaca
gggaaaacttctcgtatgctgaagaacttggctcatattcttcataaaacggataaaaca
agaaatatactttttgtggcttataccaatcgtgcggtagatgaaatttgtgaagcattg
gatgaagcgattgaaacacctttggaagatggacgaaaattcctgcgtattggatctgaa
cattcttgttctccacaatggaaggaaaatttgatgcacaacttggctcaaaatgctaac
aatagaaagatgttgagaaatggtatcgagcaacatcgcatatttgtctcgactttagct
tctattgcaggtagatcgtctcttttcaaaatcaaacaatttgatatggcggtgatcgat
gaggcttcgcagattctggaacctcagattgtaagtcttttaactaaagtcaatcgattt
gtattgattggcgatcaaaagcaattaccggccatcactcagcaagatcctgtcctttct
gaaattgactttgaagagttgaaggaaattggtctaaccgatagaagaaccgcctatttt
gaacgtatttatgctttatgtcagaaaaacaattggcactgggcatttgataggttgaag
aatcaaggacgtatgcacgaagttctagggaattttgccaaccaacagttttatcaagga
aatcttacgactgttcccctgccctggcaaagtgcttcttttgagtgggatcaactccct
gaatattctgatttagaaaagttattggtcgaacgtcgcttgctattctttcctacaaca
ggaaaaaacacctctacttccgacaagatcaatatggaagaagcaaggaaaattgccaaa
gtagccgtggcgactagaaagcgttaccttgagcaaaaaggaagctttgatattgataaa
acattaggaattatcgccccctaccgaaatcagatagccgctatccgacaagcattggaa
gaggaaggatttgaggatgcacacttattgagtattgacactgtagaacgctaccaagga
tctcaaagagaggtcattctgatttctttctgtgccaacaccccttttcaattggaaggt
atgatcagtttaacgtctgatcataaagttgatcgaaaattgaatgtggcgattacccga
gcaaaacagcaaatgatcttctttggtaatccatatattttgatgagatcttctattcat
gaatcgttaatgaactgggttcgagatcaaaagggttggattgataacgataacctatta
ttttag

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (18)   
   Pfam (18)   
All databases (53)   

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