KEGG   Finegoldia magna: FMG_0811
Entry
FMG_0811          CDS       T00661                                 
Name
(GenBank) single-strand DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fma  Finegoldia magna
Pathway
fma03410  Base excision repair
fma03430  Mismatch repair
fma03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FMG_0811
   03430 Mismatch repair
    FMG_0811
   03440 Homologous recombination
    FMG_0811
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fma03400]
    FMG_0811
DNA repair and recombination proteins [BR:fma03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     FMG_0811
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     FMG_0811
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      FMG_0811
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 DSPc DUF6802
Other DBs
NCBI-ProteinID: BAG08229
UniProt: B0S1I9
Position
complement(882474..884216)
AA seq 580 aa
MNKWLINNRGNNYNEISKKYNIHPLIAKILLNRNITDFEKFLNPNAENSYHNPFLMKDMD
KAVDIIISTIDHNEKIRIVGDYDQDGNSSTMTLLDGLGYFTDKISYDIPNRMTDGYGISF
SIIDKCIEDNIDLIITCDNGISAIEQCDYARKNGIKIIVTDHHQTIKHDGKEIIPNADAV
VNPQQQSCKYPFKSLCGAGVAYKLIQAINIKKGYGMLQCENLLQYVAMGTVCDIVDLKDE
NRYFVTKGLEEINNTDNYGLKCLINMTGIKNAVNVYSLGFIIGPCINAAGRLDTAKLGVE
LFRDENMDNVEAYAKILVDLNEKRKKLTEDGFNKAVEIIENTALKNDDILICNVEGIHES
VCGIIAGRIKEKYNKPTLILTESANKNLLKGSGRSISEYNIFEEFDEFREMFVSFGGHPM
ACGLSIEKNKLDEFRTKVNKNSKLTEEDFVKKILIDSSFYIDKIDFDLIEEIGNLRPFGK
DNPRPILGDKDVEIIFAKMIGKNQNVLKMKLLKNNKAIDAILFTDAIEKYTYLLGKFGEN
VLKELENSISCNAYIDILYYPEINDFNNVKNIQLNLIDLR
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgaataaatggttaattaataatagaggaaataattataacgaaatatcaaaaaaatat
aatattcatccattaatagcaaaaattttgctaaatagaaatatcactgattttgaaaaa
tttttaaatcctaatgcagaaaattcatatcataatccttttttaatgaaagatatggat
aaagcagtagatataattattagcactatagatcataatgaaaaaataagaatagtagga
gattatgatcaagatggaaattcttctactatgactctactagatggacttggatatttt
acagataaaatttcctatgatattcctaatagaatgacagatggatatggcatttctttt
agtataatagacaaatgtatcgaagataatatagatttaataataacttgtgacaatggt
attagtgcaattgaacagtgtgattatgcaaggaaaaatggaattaaaataattgtaact
gatcatcaccaaacaataaaacatgatggaaaagaaataattccaaatgctgatgcggtc
gttaacccacaacaacaatcttgcaaatatccttttaaaagtttatgcggtgcaggagtt
gcttataaattaatacaagctattaatataaaaaaaggatatggaatgctacagtgtgaa
aatttgcttcaatatgtagcaatgggaacagtatgtgacatagtcgatttaaaagatgag
aataggtattttgttacaaaaggtctagaagaaatcaataatacagataattacggttta
aaatgcttgatcaacatgactggaattaagaatgcagtaaatgtctacagtttaggattt
ataattggtccttgtatcaatgcagcaggaagattggatactgcaaaattaggtgttgaa
ctatttagagatgaaaatatggataatgttgaagcatatgcaaaaattttagtcgatctt
aatgaaaaaagaaaaaaactaacagaagatggatttaataaagctgtcgaaattatcgaa
aataccgcactaaaaaacgacgatattttaatttgcaatgtggaaggaattcatgaaagt
gtttgtggaatcatagctggaagaataaaagaaaaatataataaaccaactttaatctta
acggaatctgcaaataaaaatttactcaaaggatctggaagaagtatatcagaatataat
atttttgaggagtttgatgagtttagagagatgttcgtatcttttggaggccatcctatg
gcatgtggattatcaattgaaaaaaataaattagatgagtttagaactaaagttaataaa
aatagcaaacttacagaagaagattttgttaaaaaaatcttgatagactctagcttttat
attgataaaattgattttgatttgatagaagaaattggtaatttgcgtccatttggaaaa
gataatcctaggccaattttaggagataaggatgttgaaattatatttgccaaaatgata
gggaagaatcaaaatgtattaaaaatgaaattactaaaaaacaacaaagcaatagatgca
attttgtttacggatgctatagaaaaatatacctatttattaggaaaatttggtgaaaat
gtattaaaggaacttgaaaatagtatttcttgtaatgcatatatagatattttatactat
ccagaaattaatgattttaataatgtcaaaaatattcaattaaatttaattgatttaaga
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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