KEGG   Fomitiporia mediterranea: FOMMEDRAFT_104563
Entry
FOMMEDRAFT_104563 CDS       T03132                                 
Name
(RefSeq) succinate dehydrogenase
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
fme  Fomitiporia mediterranea
Pathway
fme00020  Citrate cycle (TCA cycle)
fme00190  Oxidative phosphorylation
fme01100  Metabolic pathways
fme01110  Biosynthesis of secondary metabolites
fme01200  Carbon metabolism
Module
fme_M00009  Citrate cycle (TCA cycle, Krebs cycle)
fme_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
fme_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:fme00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    FOMMEDRAFT_104563
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    FOMMEDRAFT_104563
Enzymes [BR:fme01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     FOMMEDRAFT_104563
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Pyr_redox_2 Thi4 GIDA DAO FAD_binding_3 Lycopene_cycl HI0933_like
Other DBs
NCBI-GeneID: 18670036
NCBI-ProteinID: XP_007264237
JGI: Fomme1_104563
Position
Unknown
AA seq 643 aa
MLRKALARLPKRSQQHHRAFHSSPAALRVVATNPVRAQEVTSLAAEGKYPVFDHEYDAVV
VGAGGAGLRAAFGLAEAGFNTACITKLFPTRSHTVAAQGGVNAALGNMTEDDWRWHMYDT
VKGSDWLGDQDAIHYMCREAPRSVIELEHFGVPFSRTKEGKIYQRAFGGQSLKFGKGGQA
YRCAAAADRTGHAILHTLYGQSLRHNTNFFIEYFALDLIMQDGECVGVMAINMEDGTLHR
FRSHKTVLATGGYGRAYFSCTSAHTCSGDGNGMVVRAGLPLQDLEFVQFHPTGIYGAGCL
ITEGSRGEGGYLLNSEGERFMERYAPTAKDLASRDVVSRSMTIEIREGRGVGPEKDHIYL
QLSHLPAEVLHERLPGISETAAIFSGVDVTKEPIPVLPTVHYNMGGIPTKYTGEVLTIDE
NGKDKVVPGLYAAGEAACVSVHGANRLGANSLLDIVVFGRACAHHIKENLEPGKPHKQVD
ENAGMQSIEFLDKIRTSDGPIPTAKLRLDMQKAMQTDAAVFRTEETLAEGVDKVTQIYKD
YDKVGIKDRSMIWNSDLIETLELRNLQQCAIQTITAALARKESRGAHAREDFPERDDEKW
MKHTLTFQPDPSKPDVVIKYRNVIDKTLDENECKSVPPFKRVY
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgttgcgcaaggcgctcgctcggcttccaaaacgctcgcagcagcatcatcgtgcattc
cattcgtcgcctgctgccctccgcgtcgttgcgacgaaccctgtgagagcgcaggaggtc
acttcattagcggcggagggaaagtatccagtattcgaccatgaatatgacgcagttgta
gtaggtgctggtggtgcaggcttacgagcagctttcggtcttgcagaggcaggcttcaac
acggcatgcatcacgaagttattcccgacgcgtagtcacaccgtcgcagcgcagggaggt
gttaacgccgctcttgggaacatgactgaggatgattggaggtggcatatgtatgatact
gtcaaaggatccgactggctcggtgaccaagatgccattcactatatgtgccgcgaagcg
ccaaggtcagtcatcgagctcgaacatttcggtgtgccgttctctcgaacgaaggagggc
aagatttaccaacgtgccttcggtggtcaatcactcaaattcggcaagggcggtcaagca
tatcgatgtgcagctgccgccgaccgaacaggacacgccatccttcacaccctttacgga
cagtccctccgtcacaacactaacttcttcatcgaatacttcgcacttgaccttatcatg
caagatggtgagtgcgtgggtgtaatggcaataaacatggaagacggcactttgcatcga
ttccgctcacataagaccgttctcgcgactggtggatacgggcgagcatacttcagctgc
acatcagcgcacacatgttcgggtgacggcaatggtatggtggtccgcgccggtttgcca
ctccaggatctcgaattcgttcaattccacccaacgggtatttacggtgctggatgtcta
atcaccgagggttctcgtggcgaaggcggatacctgcttaactccgagggtgaacggttc
atggagcgttacgcgccaaccgcgaaggaccttgcctctcgtgatgtcgtttctcgtagt
atgaccatcgaaattcgtgagggtcgtggtgttggacctgaaaaggaccatatttacctg
cagctaagccatttgcctgctgaggtccttcatgagcgcttgccaggcatttcggagact
gcggctatcttctctggtgttgacgtcactaaggagccgattcctgtattgccgacggtt
cattacaacatgggtggtattccgacaaagtacactggcgaggtcttgactatcgatgaa
aatggcaaagataaggtcgttcccggtctctacgccgctggcgaagccgcgtgtgtctca
gtacacggtgcaaaccgtctcggcgcaaactcgcttcttgacattgtcgtcttcggccga
gcatgcgcacatcacattaaggagaaccttgagccgggcaagccgcacaagcaggttgac
gaaaatgctggaatgcagtctatcgagttccttgataagattcgcacgtctgatggacca
atccctactgccaagttaagacttgacatgcaaaaggctatgcagaccgacgctgctgtg
ttcagaacggaagaaacgcttgctgaaggtgtcgataaggtcacgcagatctataaggac
tatgataaggtcggcattaaggataggagtatgatttggaattccgacttgattgagact
ctcgagctccgtaatctccaacaatgcgccatccaaactatcaccgctgccctcgctcgt
aaggagtcgcgcggtgcgcatgcacgcgaggacttccctgagcgcgacgacgagaaatgg
atgaaacacactctcaccttccaacctgacccatcaaagccagacgtagtgatcaagtac
cggaacgtcattgacaagacgctcgatgagaatgagtgcaagtctgtaccgccgttcaag
cgtgtgtattag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (5)   
   KEGG MODULE (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (75)   

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