KEGG   Fomitiporia mediterranea: FOMMEDRAFT_122631
Entry
FOMMEDRAFT_122631 CDS       T03132                                 
Name
(RefSeq) transcription factor IIA, alpha/beta subunit
  KO
K03122  transcription initiation factor TFIIA large subunit
Organism
fme  Fomitiporia mediterranea
Pathway
fme03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    FOMMEDRAFT_122631
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fme03021]
    FOMMEDRAFT_122631
Transcription machinery [BR:fme03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIA
     FOMMEDRAFT_122631
SSDB
Motif
Pfam: TFIIA
Other DBs
NCBI-GeneID: 18671223
NCBI-ProteinID: XP_007266349
JGI: Fomme1_122631
Position
Unknown
AA seq 293 aa
MSNKIVPAIYRAIIDDVITNIKSDFDDFGVGEDVLSDLQSRWENKVIASHVAEFEPQPQV
PQNAPQHTYPPHVPHPALQPQIHAAYPQYAPPPPPPQSHVKAEPVENRFPLPSNLPTYIP
QLPGPTLPGPPRPPSIPAGVQHHYGTTPQSIPPRPAYTQPSASAPGNTTQASSQTRIPQV
DGPSSSASDSSSPPQSQTYAPPPRSLHPSLPQPSQGQIGVADSEEINSDLDDSDSDSNEE
EQEGALGETDIVFCTYDKVARVKNKWKCVLKDGMIHVNGKDYLFGRCTCEFEW
NT seq 882 nt   +upstreamnt  +downstreamnt
atgtctaataaaattgtgcctgcaatttatcgggccataattgacgatgtaattaccaac
ataaaaagcgactttgatgacttcggcgttggagaagatgtactgagtgacttgcagagc
agatgggaaaacaaggtgattgcgtctcatgttgcagaattcgaaccgcagccacaagtg
ccacaaaatgcgcctcaacatacatatccaccacatgttccgcatcctgcacttcagccg
caaatacatgctgcataccctcaatatgctccacctccaccacctcctcaatcacacgtg
aaggcggaacctgtcgagaaccgtttcccacttccgagtaatttgcccacctatattccg
caattaccgggtccaactttgcctggaccccctcgtcccccttctatcccagctggcgtc
cagcatcattatggcacgacgccgcagagtatacctcctcgtcctgcatatacacagcct
tcggcctcggcgcccggaaatactacacaagcatcatctcaaacacgtattcctcaagtt
gacggaccgtcttcttctgcatccgattcatcgtctcctcctcagagccaaacttacgca
ccaccccctcgttcgttgcatccttctttaccccagccttctcagggccaaattggcgtg
gcggactccgaggagattaattcagatctggatgactctgactcggatagcaatgaagaa
gagcaagagggcgctcttggagaaaccgatattgtattttgcacttacgataaggtcgct
cgcgtaaaaaacaaatggaagtgtgtattgaaagatggtatgatacacgttaacgggaag
gactacctgtttggcagatgcacatgtgaatttgaatggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (36)   

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