KEGG   Fomitiporia mediterranea: FOMMEDRAFT_149629
Entry
FOMMEDRAFT_149629 CDS       T03132                                 
Name
(RefSeq) replication factor A protein 3
  KO
K10740  replication factor A3
Organism
fme  Fomitiporia mediterranea
Pathway
fme03030  DNA replication
fme03420  Nucleotide excision repair
fme03430  Mismatch repair
fme03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FOMMEDRAFT_149629
   03420 Nucleotide excision repair
    FOMMEDRAFT_149629
   03430 Mismatch repair
    FOMMEDRAFT_149629
   03440 Homologous recombination
    FOMMEDRAFT_149629
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fme03032]
    FOMMEDRAFT_149629
   03400 DNA repair and recombination proteins [BR:fme03400]
    FOMMEDRAFT_149629
DNA replication proteins [BR:fme03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    FOMMEDRAFT_149629
DNA repair and recombination proteins [BR:fme03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     FOMMEDRAFT_149629
   MMR (mismatch excision repair)
     FOMMEDRAFT_149629
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     FOMMEDRAFT_149629
SSDB
Motif
Pfam: Rep_fac-A_3 DoxX_2
Other DBs
NCBI-GeneID: 18673531
NCBI-ProteinID: XP_007272095
JGI: Fomme1_149629
UniProt: R7SGZ6
Position
Unknown
AA seq 110 aa
MDTDTEAQSTPRVNSARLSDFVGRSVRLVCKVERVKDLSAIVRASDMGQVEVKMPKAEEF
PDSFVEIIGMVEDANTIKLQGSILLGNDLDFDVVNDCITMMHNPQFETVF
NT seq 333 nt   +upstreamnt  +downstreamnt
atggacacagacacagaagcacaatcgacacctcgagtcaactcagcgcgtctcagcgac
ttcgttggtcggtcagtcaggcttgtatgtaaagttgagcgggtaaaagacttgtctgct
atcgtgcgtgcgtcagatatgggtcaagttgaagtgaagatgccgaaggcggaagagttc
ccggattcattcgtagagatcatcggtatggtcgaagacgcaaacacaatcaagttgcaa
ggtagcatcctacttgggaatgatctggatttcgatgtcgtcaacgattgcattaccatg
atgcacaacccgcaattcgaaaccgtattctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (51)   

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