KEGG   Fomitiporia mediterranea: FOMMEDRAFT_18281
Entry
FOMMEDRAFT_18281  CDS       T03132                                 
Name
(RefSeq) SNF2 chromatin remodeling protein
  KO
K15192  TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
fme  Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:fme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fme03021]
    FOMMEDRAFT_18281
Transcription machinery [BR:fme03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     FOMMEDRAFT_18281
SSDB
Motif
Pfam: DUF3535 SNF2-rel_dom Helicase_C HEAT UTP20_C DUF3385
Other DBs
NCBI-GeneID: 18677531
NCBI-ProteinID: XP_007264223
JGI: Fomme1_18281
Position
Unknown
AA seq 1944 aa
MTSRLDRLLILLDTGSSTSVRTTAAKQLAQLAAKSVRSDVGGDDVNIICLHGSLDDPSAW
AELMSVVARVLPYLHSRSYETRSAASVALSQICSLVPLWQPPGLDEDSKDAASLPPPEFS
NFSVRQLMESKTRLLASSGKEFSKPAGIFQNIAEVRKARKEAMGRLGLGFLDVADDDEMD
LDKELAAADELNVDAEMKVSTPKDEPSSQQGLGSPTEQQKKDAPPLERLKSSTPVASEDE
LAGMSARERNRLKRKRKPGNAAFVSAPPPPPNGSKYSATPAGGSSAKARLVSSDGTAQKS
RVEDSKSGVAQDKVVVDPTKGGAVEAKAAQQSKALEVQPGVWVWDGVVKVLEVDLFSPAW
EVRHGAALALREVIKAQGKCGGMRADASAAENAINHEQWCNALAAKFLCVFVLDRFGDFV
SDQVVAPVRETVSQTLASLLIHMPRRSVLHVHDILLQMIKQDFALEHPLPDAKVAKGVND
QQNGHGTQYVWEVRHVGLLGIKYEVAVRSDLVDEHVVKEEGVEGLTSGKDVLRGIVDAAV
LGLGDSDDDVRAVAASCLLPITSQLVGQLPEELPRVLAVLWSCLGDMKDDLSSSVGVVMD
LLGKLVGFDKVIEILAAPDSFKPLTDLAPTLFPFFRHTIASVRLAVVNTLHSFLKVPTLP
NEWINTAFLRLLVQNLVVEERADVRQATLDVWWTVLEVVRTVDGWMMALVTPQTLLEWYA
LAMTPLGVPIDPATLYHPSVGMQNGNGPAPERHNVDKNMLAQDLTLVPVEVILRGRVAAA
KAFAWLCVTWPESGQRHDEMFRPMLGHYIQSPSMLQKFLAAVIVEEWSHKYDEMPLPPGV
EKHELLVKESTLVMEVSDEILRWLQADPPVAYHEMAISLGRIFNECNALLQSFMQDCKVS
PKAIPFLGATIDIHGTEEGAFSIATAQQVIGPIFTSLKEGLGRTKKKELISLHEKRVRLE
ASIQHYNQVKTQHDVRVSAAFAGAYVSLKILPEKVSPIVKGIMNGIKNEENIDLQARSAS
AVATFVSTCTAMKIAQPPEKIVKNLCTFLCQDVGQTPAFALTKQLEKCIWSAKAILASES
QTANGKGAKIAQVDFPSEADKARISRRGAELAFGALSSKFGEQLFAQVPKMWEFMAGGLL
ATFQTDFTVRDADKLMDKQTGQDVIDSLSVLKVTATTLHEGLHDHLVELLPKLSLALRSR
YAIIRQCTAKCFATICSVITVQAMKYVIEEITPFLGDAKITTNRQGVVELIYHVVQELDI
KALPYVIFLIVPILGRMSDTDNDIRTTATNTFAALVKMVPLEAGLPDPPEFSEELLRRRQ
EERMFLTQLLDGSKVEQYNLPVKINAELRKYQQDGVNWLAFLAKYQLHGILCDDMGLGKT
LQSICILASKHFERAERYNATQSPDSVHLPSLIVCPPTLTGHWYYEILKYTETLKPLMYV
GSARDRQRLLSKFPAYDIIITSYEVVRNDIANLQNLNWHYCILDEGHVIKNSKTKLTKAV
KQIRSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGSEYSFNERFSKPILSNRDGKSKND
EAAALALEALHKQVLPFLLRRLKEDVLNDLPPKIIQDYYCELSDMQRLLYDEFAKSHAAD
SATDLVQTSNGDVNKGPGQKHVFQSLQYLRKLVNHPALILKDDQESIKAALERVQAKDTV
EGLRDITHAPKLLALKQILLDCGIGTGAAASVDTTGKSELLETEDTSAGVFSQHRVLIFC
QLKQMIDIIESDLFKRHMPSVTYMRLDGGTDPNKRHAIVQTFNADPSIDCLLLTTHVGGL
GLTLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITKGTLEEKIMGLQRFK
LNIANSIVTQQNAGLESMDTDLVLDLFKRTTQEEDAAAAKKRKERERSGQFGQKNILEGL
EDLPAEEEYESLTLSSFMGSLGQQ
NT seq 5835 nt   +upstreamnt  +downstreamnt
atgacttcaaggttagacagactattaattctgctggacaccgggtcgtcgacctcggtg
cgcacgacggcagcaaagcagctcgcgcagcttgcagccaagagcgtcagaagtgacgtc
ggcggggacgatgtaaatattatctgtttgcacggctccctagatgatccctctgcttgg
gctgaacttatgtccgtcgttgctcgagtccttccttatctacactcacgatcttacgaa
acacgatcagctgcttcagtagcactatctcaaatatgctccctcgttcctctctggcaa
cctccaggattagatgaggactcgaaagatgccgcctcgttaccgcctcccgagttttca
aatttttccgtacgacagctcatggagagcaagactcgccttctcgcgtcgtctgggaaa
gagttctccaaacctgccggcatttttcaaaacatcgccgaagtacggaaagcccgtaaa
gaggctatgggacgattaggcttaggcttcctagacgttgctgacgacgatgaaatggac
cttgacaaggagctcgctgcggcggacgaacttaatgttgatgcggagatgaaagtcagc
actccaaaggatgagccaagtagtcagcaaggacttggttcacctacagagcagcaaaag
aaggacgcacctcccctggagcgtttgaagtcgagtacgcccgtcgcgtccgaagacgaa
ctggctggaatgtcggctcgagaacgtaacagattaaagcgaaaacgaaaaccgggaaat
gctgcttttgtatccgcccctccaccaccgccaaacggttccaagtacagcgcaacccct
gcaggcgggtcgtctgcaaaagctcgtcttgtttcctctgacggaacagcacagaagtct
cgtgttgaggactccaaatcaggtgttgctcaggacaaggtcgtggttgatcctacaaaa
ggaggtgccgttgaggcgaaagctgcacaacagtcaaaagccctcgaagttcagccaggt
gtatgggtctgggatggtgtagtcaaagtgcttgaagttgatctcttcagtcccgcatgg
gaggtacgccatggtgcagccttagctctgcgagaagttattaaagcccagggcaagtgc
ggaggcatgagagccgacgcatcagccgctgaaaacgcaatcaatcacgaacaatggtgc
aatgcgcttgctgcgaagttcctctgcgtcttcgtgctcgatcgattcggagatttcgtt
tctgatcaggtcgtcgcacctgttcgagagacagtctcgcaaacgcttgcctccctgctc
atccacatgccgcgtcgctcggtcttgcacgttcacgacatcctccttcaaatgattaag
caagactttgccctagagcatcccttaccagacgctaaagtcgccaagggtgtcaatgat
cagcaaaatggtcatggcactcagtatgtgtgggaagtcagacatgtcggcttactcggg
atcaagtatgaggttgcggtacgctctgatcttgtggacgaacatgtggtgaaggaggaa
ggtgttgaaggacttacgagtggaaaagatgtccttcgtggtattgtggatgccgccgta
ctggggttaggagactctgacgatgacgttcgagccgtcgccgcgtcgtgcttgctccct
attacgtcccagctcgttggccagttaccagaagagcttccgagagtattagccgttttg
tggtcttgtcttggtgacatgaaagacgaccttagctcgagtgttggagttgtaatggac
ctcctcggaaagctggtcggtttcgacaaggtcatcgaaattttggccgctccggacagc
ttcaaacctttgacagatctagctcctacactgtttcccttcttccgacatacgatcgca
tctgttcgcctcgccgttgtcaataccttgcattcgttcttgaaagttcctactttgcct
aatgaatggatcaatactgcattccttcgactgttggtacagaacttggttgtcgaagag
cgagccgacgtccgacaggcaacactggacgtttggtggactgttcttgaagtggttcgt
actgtggatggatggatgatggctctggtaactccacagacacttttggagtggtacgca
cttgccatgacgcctcttggtgtgccgatcgaccccgcaactctgtatcatccatctgtg
ggcatgcaaaacggcaatggacctgcaccggaacgacataacgtcgacaagaacatgctt
gcacaggatctgacgctcgttcccgttgaggttatcctgcgtggacgcgtcgcagctgca
aaagcttttgcatggctctgcgtaacgtggccggaatcaggccagaggcatgatgagatg
ttccgtccaatgctcggacattacattcaatcaccgagcatgttgcagaagttcttagcg
gcagtcattgtcgaagagtggtcgcataaatacgacgaaatgcccttgccaccgggtgtt
gagaaacacgaattattggtgaaagagtcgacgttggtgatggaggtctcagatgaaata
ctgcggtggttacaggcagatcctcctgtggcgtatcatgagatggcaatttctcttggt
agaattttcaacgagtgcaatgcgcttctgcaatcctttatgcaagattgcaaggtctca
ccgaaggcaattccgttcttgggtgcgacgatcgatattcatggtacggaagaaggcgca
ttctcgattgccactgcccagcaagtcatcggaccgatcttcacctcgctcaaagaaggc
cttggacgaacgaagaagaaggaattgatttctttgcacgaaaaacgagttcgcttggag
gcgtcaatccaacattataatcaggttaagactcagcacgacgttcgggtgtctgcggcc
tttgctggtgcatatgtctcgctcaagattctgcctgagaaagtttcgccaattgtgaaa
ggaatcatgaacggcatcaagaacgaagagaatattgacttgcaagcgaggtctgcttca
gccgttgccacatttgtgtcgacgtgtacggctatgaagattgcccagcctcccgagaag
atcgtgaagaacttgtgtaccttcctctgtcaggatgtgggacagacgcctgcattcgca
ctgactaaacaactggagaaatgcatttggtcagcaaaggccattttagcaagcgagtcg
cagacagcaaatgggaaaggtgcgaagatcgcgcaagtggatttcccgtccgaggcggac
aaagcgaggatttcacgaagaggtgcagaacttgccttcggggcgctgtcatcaaagttt
ggcgagcagttgttcgcccaggtccccaagatgtgggagtttatggctggcggtttgttg
gctacgttccaaacagattttaccgttcgtgatgccgataaactcatggacaagcaaacg
ggtcaggacgtgatcgactcgctgagtgtcttgaaagttaccgctactaccctgcatgaa
gggcttcacgatcatttagtcgagctgctaccgaagctgagcctcgccctacggagtcga
tatgctatcattcgtcaatgtaccgcgaagtgctttgcaacgatttgcagtgtaattacg
gtacaggcgatgaaatatgttattgaagagatcacccctttcctgggagatgccaaaatc
acaactaaccgacagggcgttgttgagttgatctatcatgtagtacaggaacttgacatc
aaggctctaccttatgttattttcttgattgtacccatacttggacgaatgagcgacacg
gataatgatatccgaacgactgctacgaatacttttgcagccttagtgaagatggtccct
cttgaggctggacttccagaccctccagagttttctgaggagctgcttcgccgtcgtcag
gaggaaaggatgttcttaacgcaacttttagacgggagcaaggtcgagcagtacaatttg
ccagtgaaaataaatgccgagctacgaaaatatcagcaggacggagtcaactggcttgct
ttcctcgccaaataccaattacatggcatcctttgtgatgacatgggtcttggaaagaca
cttcaatcaatttgcattttagctagcaagcacttcgagcgtgcagagcgatacaatgcg
actcagtcccctgactcggttcatttgccttcccttatcgtttgtcctccgactcttact
ggccattggtactatgaaatcctcaagtacacggagaccttgaaacccctcatgtatgtg
ggatcagcgcgagaccgtcagcggctcctatcgaagttccccgcctacgatatcattatt
acgtcttacgaggtagtcaggaacgatattgcgaacctacagaacctgaactggcattat
tgcattttggacgaaggtcatgttatcaagaactcaaagacaaagctgacaaaggcggtc
aagcagattcgttctaaccaccgtcttatcctctctgggacacctattcagaacaatgtt
ctcgaattgtggagtttgttcgacttcttaatgccagggttccttggcagcgaatattca
ttcaacgagcgattcagcaaaccaatattatcgaatagggacggcaagtccaagaatgat
gaagcggcggcccttgcactcgaggcgctccataagcaggtcttgccgttcctccttcgg
cgtctcaaagaggatgtcttgaatgatctaccaccgaagatcattcaggattattattgc
gagctctcagacatgcagaggcttctttatgacgaatttgcgaaatctcatgccgccgac
tcggctacagatcttgtccagactagtaacggcgatgtcaataaaggtcctggacaaaag
catgttttccagtcacttcagtacctgcgaaagcttgtcaatcatccggcgctgattcta
aaagacgaccaagaatctattaaagcggctttggagagggtacaagctaaggacaccgtt
gagggcctgcgagatataacacatgcaccgaagttattagcactcaaacaaatccttctt
gactgtggcatcggtacaggagcagctgcgagtgtcgatacgacgggtaaaagtgaactc
ctcgagacggaagacacttccgcaggagtcttctcgcagcaccgcgtactcatcttctgc
caattgaagcagatgatcgatattatcgaatcggatctcttcaagaggcacatgccgagc
gtaacgtacatgcgccttgacggcgggacagatccaaataaacgacatgcaattgtgcag
accttcaatgcagatcctagtattgattgtcttctattaacaacgcatgtgggtggtttg
ggtctgactttaactggcgcggacacggtcatattcgtggagcacgattggaatccgatg
aaggatctccaagcgatggatcgtgcacaccgaattggccaaaagaaagtagtgaatgta
taccgcttgattacgaaaggtactttagaagagaagattatgggcttgcaacgtttcaag
ctcaacatagcaaattcaatagtaacacagcaaaatgcggggctagagtccatggacacc
gatctagtacttgatctcttcaagcggacgacgcaggaggaagatgctgctgcggccaaa
aagcggaaggagagagaacgaagcgggcaattcggtcaaaagaatatcctcgagggtctc
gaggacctccccgcggaggaggaatacgagagccttactctgtcaagcttcatgggttca
cttggacaacaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (48)   

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