KEGG   Fomitiporia mediterranea: FOMMEDRAFT_187129
Entry
FOMMEDRAFT_187129 CDS       T03132                                 
Name
(RefSeq) hypothetical protein
  KO
K18580  rhamnogalacturonan hydrolase [EC:3.2.1.171]
Organism
fme  Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:fme00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    FOMMEDRAFT_187129
Enzymes [BR:fme01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.171  rhamnogalacturonan hydrolase
     FOMMEDRAFT_187129
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3
Other DBs
NCBI-GeneID: 18677598
NCBI-ProteinID: XP_007269366
JGI: Fomme1_187129
Position
Unknown
AA seq 441 aa
MAFGLAFLSFLLALPSVFAQLSGRVGPTTPLSAKQATICNVLNFGGSVGSSDIGPAIGNA
FTNCVLKNPNGSTLYVPAGNYSMQTWQTLKGGSKWAFQMDGVITRNSTTGENMIVIQNAN
DFEFFSNNSAGAIQGNGYLARNAGPRLVRIVNSNNFSMHDLILVDSPVFHLVIQQGSNGE
IYNMAIRGANIGGSDGIDVWGTNYWIHDIEVTNRDECVTVKSPASNILVERIWCNQSGGS
AIGSLGTGTAIQDVLYRNVYTNGGNQIFMIKSNGGNGTVKNVVFDTFLSRGTAYGLNVDQ
YWSELAEQAGDGVQLRNITFKNWDGAVIDGVRRSPIQFLCADGALCTGMTLQNVSLWSDT
NAATNKCRSAFGSGACLRSGTPSSYPAVTTTISRPPGYSTPPTLSGDLSTGFATNSSIPI
PTIPTMFFPGLPQISPLAKNS
NT seq 1326 nt   +upstreamnt  +downstreamnt
atggctttcggattagcatttttgtcttttctgcttgcgttaccgtccgtgtttgcgcaa
ctctcaggcagggtgggacctacgactccgctatccgcaaaacaagcgacaatatgcaat
gttctcaacttcggcgggtctgtcgggtctagcgacatcggaccagctatcgggaacgcg
ttcacgaattgtgtgctgaagaatcctaacggctcgacattgtatgtccctgcgggaaac
tacagcatgcagacttggcagacactcaaaggtggctcgaagtgggctttccagatggac
ggtgttatcactcgtaacagcacgacgggtgagaatatgatcgtcatccagaacgcgaac
gacttcgagttcttctcgaataatagcgcgggagcaattcaaggaaatggctacctagct
cgcaatgcaggacctaggctggttcgtatcgtgaattcaaacaatttctcgatgcatgat
ttgatcttggtcgattctcctgtgtttcacctggtcatccaacaaggctcaaacggggag
atctacaatatggctatacgcggggcaaacatcggtggatcagatgggatcgatgtctgg
ggcacgaactactggatccacgacatagaagtcactaaccgggatgaatgcgtcaccgtc
aagtcacctgcgagcaacatactcgtcgagcgaatctggtgtaatcaatccggcgggtct
gctattggttcccttgggacaggcacagcaatccaggacgtcctctatcggaacgtctac
acgaacggcgggaaccagatcttcatgatcaagtcaaacggcgggaacggaactgtgaag
aacgtggtgttcgacacattcttgagtcgcggcacagcgtatggactaaatgtggaccag
tattggagtgagctggcagagcaggctggtgatggcgtgcagctgcgtaatatcacgttc
aagaactgggatggtgcagttatcgatggcgtccgacgctcgccaatacagtttctctgc
gccgacggggcactctgcacgggcatgactctccaaaatgtcagcctctggtcggacacc
aacgcggcaaccaataagtgccgtagcgcgttcggttcgggtgcgtgcctccgctccggg
acaccgtcgagctatccagcggtgacaacaacgattagtcgacctcctggctactcgact
ccacctactctttcaggcgacttgtcgacaggatttgcaacaaattcgtctattccgatt
ccgacgattccaacgatgttctttcctggtctcccgcagatctcgccactggcgaagaac
tcttaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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