KEGG   Francisella marina: F0R74_06245
Entry
F0R74_06245       CDS       T06206                                 
Symbol
rnr
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
fmi  Francisella marina
Pathway
fmi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fmi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    F0R74_06245 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fmi03019]
    F0R74_06245 (rnr)
   03016 Transfer RNA biogenesis [BR:fmi03016]
    F0R74_06245 (rnr)
Enzymes [BR:fmi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     F0R74_06245 (rnr)
Messenger RNA biogenesis [BR:fmi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     F0R74_06245 (rnr)
Transfer RNA biogenesis [BR:fmi03016]
 Prokaryotic type
  tRNA degradation factors
   F0R74_06245 (rnr)
SSDB
Motif
Pfam: RNB S1 OB_RNB RNase_II_C_S1 Ras CSD2
Other DBs
NCBI-ProteinID: QEO57472
Position
complement(1284418..1286709)
AA seq 763 aa
MSKYNIHNDPNRDVEAQKYENPIPSREVILKYIKDTNIPVSIENIANALEIFKKNLFDGL
VNRLGAMVRDGQLEKDKSYYNLPEMTPIYITSKVTADRDSRLELFSHTLNTKVGIVSHQT
KMVMAGDEVTAKVLGLNKRGRIDAEIKTIVSRSQKTITGYYYKSFDCDFIKPISKSMTSD
IVLLPPRQKIEHNSLIEAEIVVYPSINSAAVAKFKQEVEAVSPVKEAMMMATQKYDLIEQ
WSKKALRYLDNISDDVIVGNRVDLRNENFVTIDGEDAKDFDDAVYAHKTKSGGWKLYVAI
ADVSNYVEKDSGLDLDAKRRSTSVYFPGYVIPMLPEKLSNGLCSLKPNEDRYSLVCEMNI
SKIGKLSRYKFYSAVINSKARLTYTEVAKLLEKKQNSIVDKTPELIPNLFDLYELYKVLH
GARQERGAIDFDTVETQIILNEHNHIESIVPRHRNDAHRLIEECMLVANVAAAKFTIKHK
KTSPFRVHSEPKEDRMETLKKYLAKHGIHLAYGKNGKVTPKALAEMLDSIKDRPDYDDIQ
MMTLRSMNQAVYSINNDGHFGLAYSEYTHFTSPIRRYPDLVVHRIIKSIIGEYEHGGADY
KSSELANICENASNQERNADGASKQVENWLKCYFMQDYIGNVLEAQVKHVNGLGLFAELK
DMYIEGLIHVSAIPGDYYIYDEAKDILIGKRTHKVYKIGQDITVRVVRADLERIHIDFEL
YDPRKPNLDKNNDKPYPKKSKKPNKAKKKRARRRKKAKTKAAQ
NT seq 2292 nt   +upstreamnt  +downstreamnt
gtgagtaaatataatatacataatgatcctaatagggatgtcgaagcacaaaagtacgag
aatccaattccaagtagagaagtgattctaaaatatataaaagatactaatattcctgtt
agtatagaaaacatcgctaatgctttagaaatttttaaaaaaaatctttttgatggtctt
gtaaatcgtttaggtgcaatggttagagatggacagttagaaaaagacaaatcatactat
aatctaccagaaatgacgccaatatatataacatctaaagtaacagctgatagagactcc
cgtttagagttatttagccatactttaaatactaaggttggaattgtatctcatcagaca
aaaatggtaatggctggtgatgaagtaacagctaaagttcttggacttaataaacgtggt
cgaatagatgcagaaattaaaacaatagtttcaagatcacaaaaaaccatcactggatac
tactataagagttttgattgtgattttattaagccgataagtaagagtatgacaagtgat
atagtgctattaccaccgaggcagaaaatagaacacaattctctaattgaggccgagatt
gttgtttatcctagtataaatagtgcagctgtagctaagtttaagcaagaggtcgaagca
gtatctccagttaaagaagcaatgatgatggcaacacagaagtatgacttaatagaacag
tggagcaaaaaggctttgcgctatttagataatatttctgatgatgtgattgttggtaat
agagttgatttgcgtaatgaaaattttgtaactatcgatggtgaagatgccaaagatttt
gatgatgctgtttatgcacacaagactaaaagtggtggctggaaactatatgttgcgatt
gcagatgtgtcaaactatgttgagaaagattcaggcctagatttggatgcaaagcgtcgc
tcaacttctgtttattttcctggatatgttattccgatgttaccagagaagttatcaaat
ggattatgttcgttaaaacctaatgaggatagatactctctagtttgtgagatgaacata
tctaaaattggtaagctttctagatacaagttctattctgcagtaataaattcaaaggcg
cgcttaacttatacagaggttgcaaaacttttagagaagaaacaaaattctatagttgat
aaaactcctgagttgataccaaatctatttgatttatatgagttgtataaagtgctacat
ggagctaggcaagagcgaggtgctatagactttgataccgttgaaacacaaataatatta
aatgagcataatcatattgagtcaatagtaccaagacatcgtaatgatgcgcatagatta
atagaagagtgtatgcttgtggcaaacgttgcagcagctaaattcaccattaagcataaa
aaaacatcgccatttagagttcatagtgagcctaaagaagataggatggagactcttaag
aagtatcttgctaagcatggtatacatcttgcatatggtaaaaatggcaaagttacacca
aaggctttggcagaaatgttagatagcataaaggatcgtcctgattatgatgatattcag
atgatgactttgcgtagcatgaatcaagcggtgtatagtataaataatgatggacacttt
ggattggcatatagtgaatatactcattttacatcgccaattcgaagatatcctgactta
gtagtacacagaataattaaatcaattattggcgagtatgagcatggtggtgctgattat
aagtcttctgaattagcaaatatttgtgagaatgcttctaatcaagaacgaaatgcagat
ggtgcatcaaagcaagttgagaactggttgaaatgctatttcatgcaagactatattggt
aatgttttggaggctcaagttaagcatgttaatggcttaggtctatttgctgagctaaaa
gatatgtatatagaaggcttgatacacgtttctgctattccaggggattattatatttat
gatgaagctaaagatatattgattggtaagagaactcataaagtttataagataggtcaa
gatattactgtaagagttgtcagagcagatttagaaagaattcacatagattttgaatta
tatgatccacgtaagccaaatttagataaaaataatgataagccgtatcccaagaagtca
aaaaaaccgaataaggctaagaaaaaaagagctagacgtagaaaaaaagcaaaaacaaaa
gcagctcaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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