KEGG   Francisella marina: F0R74_09065
Entry
F0R74_09065       CDS       T06206                                 
Name
(GenBank) RNB domain-containing ribonuclease
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
fmi  Francisella marina
Brite
KEGG Orthology (KO) [BR:fmi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fmi03016]
    F0R74_09065
Enzymes [BR:fmi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     F0R74_09065
Transfer RNA biogenesis [BR:fmi03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    F0R74_09065
SSDB
Motif
Pfam: RNB FAD_syn
Other DBs
NCBI-ProteinID: QEO57992
Position
1864264..1866138
AA seq 624 aa
MLLENQSIKNALVIFKSKPAKVVEILDKKIEIETLDSKNIKLPAKNVQILTVVDHDFDLD
KLERLEIPELELTWELLQEQQQTSIDELSELLFESVGANQAYTVWLLVSEGEYFSFNDDF
TINIHTQEQKDQVVRDKHEKLKKEQELNDFIERLNNKTFNVEDTKFLKEIEALATLKSTK
CRFFKYLNMEESENSAYKLLLDIGYWDEFFNPYLYRYGAELESNTTDFKYNSESDSQRAD
LTHLTAYAIDDEGSNDPDDAISWDAQQNKMWVHIADPSSSISFGDEVDLEARARGSNLYV
PEHIITMLPPHATQKLGLGLQEVSPALSVGFRIDESGDIHDIEICFSNIKVTRYSYEFVE
ENISNLELGEIEVYAKYFTDKRLAKGAVELDFPEIKILLDNDKNVKLTDLPRLNSRTLVR
DTMLMAGVAIGQFCKENNICVPFSTQPEHDLKQDDLENIDSIADMFATRKKLQRGKYSTE
PDVHAGMGLDSYVQVTSPLRRYLDLLVHYQLRNFLENKQMISIDDVDNIIAQVDIPIKSN
RQTERFSNSHWKLVYLMQNPNLEFQAAVIEKLDKGRLMVSIADLAMTKKLAVSGKYDLND
QIKLQNTSVNLVTQEAFFKVIEES
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgttacttgaaaatcagagcatcaaaaatgccttagtaatttttaaatcaaaacctgca
aaggttgtagagatattagataaaaaaatagaaatagaaactttagatagtaagaatata
aaattacctgcaaaaaatgttcaaatacttacagttgtagaccatgatttcgatttggat
aagcttgagagattagaaattcctgagttagagttaacatgggaattattgcaagaacag
caacaaacgtctattgatgaattaagtgagcttctttttgaatccgtaggagctaatcaa
gcttatactgtatggcttttggtttcagagggagagtattttagctttaatgatgacttt
actatcaatattcatacacaagagcaaaaagatcaagtagtcagggataaacatgagaag
ctcaaaaaagagcaagaactaaatgattttatagaacgtctaaataataagacttttaat
gtcgaagacacaaagttccttaaagagatagaggctttagcaacacttaaaagtacaaaa
tgtcgtttctttaaatatttaaatatggaagagtctgagaatagtgcgtataagctactc
ttggatattggttattgggatgaattctttaacccttatctatatcgatatggtgcggaa
ttagaaagtaatactactgattttaagtataattctgagtcagatagtcagcgtgctgat
ctaacacatctgactgcctatgctatagatgatgagggtagtaatgatcctgatgatgca
attagttgggatgctcaacaaaataaaatgtgggttcatatcgctgacccttcttctagc
attagttttggagatgaagtagatcttgaggctagagcacgaggttctaatttatatgtg
ccagagcatataattacgatgttgccacctcatgcaacacaaaagttaggtttaggccta
caagaagtttctccagctttgtcagtaggatttagaattgatgagtcgggtgatattcat
gatattgagatatgttttagtaatataaaagttactagatattcttatgagttcgttgaa
gaaaatatctctaatctagaacttggagaaatagaggtttatgctaaatatttcactgat
aagcgtttggcaaaaggagcggtagaacttgattttcctgagataaaaatattattagat
aatgataagaatgtcaaactaactgacttaccacgcttaaactcaagaacattggtacgt
gatactatgctaatggctggagttgcgattggacagttttgtaaagaaaataatatttgt
gtacctttttcgacacagccagagcatgatcttaaacaagacgatttagagaatattgac
tcaatagctgatatgtttgcaacacgtaaaaagctccaaagaggtaaatactctacagaa
cctgatgttcacgcaggtatgggtttagattcttatgtacaagtgacaagtcctctaaga
agatatttagatttacttgttcattatcaattacgtaatttcttagaaaataagcaaatg
attagcattgatgatgttgataatataattgctcaagtagatattcctattaagtcaaat
agacaaacggagcgtttttctaattctcattggaaattagtctatctaatgcagaatcct
aatttagagttccaagcagcagttattgaaaaattagataaaggtcgtttaatggtttct
atcgcagatttagcgatgactaaaaaacttgctgttagtggtaagtacgatttaaatgat
caaataaaattacaaaacacctctgtaaaccttgttacacaagaggctttctttaaggtt
attgaagagagttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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